Gene
RNA
| Item | Value |
|---|---|
| gene id | G1836633 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 17100101 ~ 17100840 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2103213 | True | 488 | lncRNA | 0.41 | 2 | 17100101 | 17100840 |
17,096,800
17,097,200
17,097,600
17,098,000
17,098,400
17,098,800
17,099,200
17,099,600
17,100,000
17,100,400
17,100,800
17,101,200
17,101,600
17,102,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503085 | NA | coding | downstream | 22244 | 17067278 ~ 17077857 (-) |
| LOC110502348 | LOC106605759 | coding | downstream | 32584 | 17027749 ~ 17096659 (-) |
| LOC110502346 | pkdcc | coding | downstream | 176122 | 16891354 ~ 16923979 (-) |
| LOC110502345 | eml4 | coding | downstream | 336059 | 16673409 ~ 16764042 (-) |
| LOC118943947 | NA | coding | downstream | 453669 | 16646380 ~ 16646432 (-) |
| LOC110502353 | LOC106605805 | coding | upstream | 319483 | 17420323 ~ 17425430 (-) |
| LOC110502354 | ncoa4 | coding | upstream | 343634 | 17444474 ~ 17453469 (-) |
| LOC118943816 | NA | coding | upstream | 353866 | 17454706 ~ 17471690 (-) |
| LOC110502357 | LOC106605561 | coding | upstream | 410520 | 17508036 ~ 17647588 (-) |
| LOC110502361 | LOC106605890 | coding | upstream | 624495 | 17725263 ~ 17781515 (-) |
| G1836631 | NA | non-coding | downstream | 2202 | 17097676 ~ 17097899 (-) |
| G1836607 | NA | non-coding | downstream | 36167 | 17060600 ~ 17063934 (-) |
| G1836473 | NA | non-coding | downstream | 126901 | 16972948 ~ 16973200 (-) |
| G1836472 | NA | non-coding | downstream | 127327 | 16971559 ~ 16972774 (-) |
| G1836642 | NA | non-coding | upstream | 5090 | 17105930 ~ 17106480 (-) |
| G1836644 | NA | non-coding | upstream | 7363 | 17108203 ~ 17108433 (-) |
| G1836652 | NA | non-coding | upstream | 17950 | 17118790 ~ 17119028 (-) |
| G1836839 | NA | non-coding | upstream | 157484 | 17258324 ~ 17258536 (-) |
| G1836860 | NA | non-coding | upstream | 175580 | 17276420 ~ 17276795 (-) |
| G1835092 | NA | other | downstream | 1352366 | 15745638 ~ 15747735 (-) |
| tmem254 | cj057 | other | downstream | 1428921 | 15666203 ~ 15671223 (-) |
| G1834927 | NA | other | downstream | 1599840 | 15498754 ~ 15500261 (-) |
| G1834810 | NA | other | downstream | 1933182 | 15166209 ~ 15166919 (-) |
| G1833570 | NA | other | downstream | 2579172 | 14520349 ~ 14520929 (-) |
| G1837980 | NA | other | upstream | 608932 | 17709772 ~ 17719204 (-) |
| LOC110502394 | LOC106606249 | other | upstream | 1748857 | 18849389 ~ 18854222 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | upstream | 2011202 | 19111958 ~ 19145332 (-) |
