G1836916


Basic Information

Item Value
gene id G1836916
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 17322174 ~ 17325360 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2103510
ctctctgtctctctctctgtctgtatctcgttttctctctgtctgtatctcattttctctctgtctgtatctcgttttctctctgtctctctctgtctgtatctcattttctctctgcctgtatcttattttctctctgtctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctctctctgtctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgtctctctctctgcctgtattttgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctgaatcTCGTTTTCTCTCCGTCTGTATgtcattttctctctgtctgtatctcgttttctctctgtctctctctgtctgtatgtcattttctctctgtctgtatctcgttttctctctatctctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctgtatctcattttctctctgcctgtatcttattttctctctgtctgtatctcgttttctctctgtctctctctgcttgtaTCTCGTTTTCTATCTGCCtgtatctcgttttctctctgcctgtatctcattttctctctgcctgtatctcgttttctctctgcctgtatctcattttctctctgtctgtatctcgttttctctctgtctctctctgtctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgtctctctctctgcctgtattttgttttctctctgcctgtatctcgttttttctctgtctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctgaatctcgttttctctctgtctctctctctgactgtatctcgttttctctctgtctctctctgtctgtatgtcattttctctctgtctgtatctcgttttctctctgtctctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgtctctctctgtctgtatgtcattttctctctgtctgtatctcgttttctctctgtctctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctctctctctgcctgtattttgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgcctgtatctcattttctctctgtctgtatctcgttttctctctgtctctctctgtctgtatctcgttttctctctgtctctctctctgcctgtatctcgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgtctctctctctgcctgtattttgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgcctgtatcttgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgcctgtatttcgttttctctctgtatctcgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttcactctgtctgtatctcgttttctctctgtctgtatctcgttttctctctgtctgtatctgtctgtatctcgttttctctctgcctgtatctcGTTTTCTTTCTGCCtgtatctcgttttctctctgcctgtatctcgttttctctctgtctgtatctcgttttctttctgtctgtatctcgttttctctctgtctgtatctcgttttctctctgtctctctctgtctgtatctcgttttctctctgtctctctctgcctgtatctcgttttctctctgtctgtatctcattttctctctgtctgtatctcattttctctgtctctctctgtctgtatctcgttttctctctgcctgtatctTGTTTTCTTTCTGCCtgtatctcgttttctctctgcctGCATCTCgttttctctgtctgtatctcgttttctctctgtctgtatctcgttttctctctgtctgtatctcattttctctctgtctgtatctcgttttctctctgtctgtatctcgttttctctctgtctgtatctcgttttctctctgtctctctctgtctgtatctcgttttctctttgtctctctctgcctgtatctcgttttctctctgtctgtatctcgttttctctctgtctcagtgtctcgCTCTTTCTTTTGCTCTCTCCCTTTTTTTCTCTTTTCTGTATGCACATCTTCCTCTCACTTTTTTTGTGTGGcttttttgtctttattttcctttctctgtgtctttgttttatctcctatctgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2103510 True 2921 TUCP 0.43 2 17322174 17325360

Neighbor

gene id symbol gene type direction distance location
LOC110502351 LOC106605778 coding upstream 92461 17212463 ~ 17229713 (+)
LOC110502347 LOC106605756 coding upstream 297485 17019443 ~ 17024689 (+)
LOC100136775 LOC100136775 coding upstream 473930 16845276 ~ 16848244 (+)
LOC110502342 LOC106605363 coding upstream 662306 16656558 ~ 16659868 (+)
LOC110502341 LOC106605225 coding upstream 784744 16534553 ~ 16537430 (+)
LOC110502355 LOC106605823 coding downstream 127006 17452366 ~ 17481755 (+)
LOC118943817 NA coding downstream 142269 17467629 ~ 17469647 (+)
LOC110502358 LOC106605838 coding downstream 163638 17488998 ~ 17503651 (+)
LOC110502359 LOC106605853 coding downstream 346861 17672221 ~ 17704270 (+)
LOC110502364 mea1 coding downstream 396306 17721666 ~ 17724320 (+)
G1836879 NA non-coding upstream 29356 17292518 ~ 17292818 (+)
G1836855 NA non-coding upstream 47626 17274337 ~ 17274548 (+)
G1836825 NA non-coding upstream 72794 17249165 ~ 17249380 (+)
G1836641 NA non-coding upstream 215771 17106050 ~ 17106403 (+)
G1836638 NA non-coding upstream 217581 17104325 ~ 17104593 (+)
LOC110502352 LOC106605787 non-coding downstream 69044 17300197 ~ 17403796 (+)
G1836968 LOC106605805 non-coding downstream 95007 17420367 ~ 17424037 (+)
G1836987 NA non-coding downstream 158885 17484245 ~ 17484806 (+)
G1836991 NA non-coding downstream 179555 17504915 ~ 17505168 (+)
G1836994 NA non-coding downstream 180214 17505574 ~ 17506069 (+)
G1836646 NA other upstream 209347 17112370 ~ 17112827 (+)
G1836321 NA other upstream 428835 16892235 ~ 16893339 (+)
LOC110502340 kcng3 other upstream 797348 16519036 ~ 16528382 (+)
G1835378 NA other upstream 1119314 16195168 ~ 16202860 (+)
LOC110502370 NA other downstream 618102 17943337 ~ 17947408 (+)
LOC100136626 LOC106606089 other downstream 964520 18269654 ~ 18300278 (+)
G1838719 NA other downstream 1623157 18948517 ~ 18949003 (+)
G1839383 NA other downstream 2196904 19522264 ~ 19523012 (+)
LOC110502420 slc18a2 other downstream 2711763 20037044 ~ 20058237 (+)

Expression


Co-expression Network