G1836993


Basic Information

Item Value
gene id G1836993
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 17506223 ~ 17507897 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2103587
ggGAAGAGGGTTTGGGGCAGCCCTGGCCTATAACATGCATTTCATTCATATCAATGGGAGAATTCAACACCATAAATGTAGACATGAATAAGATGTAAATAACAAACAACAATGGAGGCATATATTGACGTGAGAAGACAGTGACAGCATCTTTATTAGTATTCCTGAACCATGTAATTGCAATGCCAACGTCCTCGTGCAGGGACTGGCTTTGTCATCAAGCTCAGATTGTATGATTACGCCGTCTGTGTGGGATATTACACAGTAAACCCTGTCTCTGTATTCATATGTAGAGCCAGGGTTTTCGAATTGTATAATGTAATACTTTACACTCCAGTTGTTCAAATATTCTTGCAGATCAATATTTCCAATAAACCCCTGGCGCTGTCTCAAAACTGTCACAATGGAGACAAGGCTCCTGTGAACCAACTGGCATGCTGTTTAAATCATGCTCAGACTAAAAGCTATATCGTGAAAATAACTGAGCGAGCTACCTGTTAAAAGGTCACCGTCACAGAGGGATTACCGTCATGACTAGTGTGTTTATTCCACCGCATCAGATAAAAGGAGTGACGAAGCCAACATTTCTCAGACTAAATTTAAAACGCTCCACGCGAGTGGAGCATCTCGGGGGAAGGCGACCTTGGATCAAAGAAGAGACGCGTCAGCAGAGATGTGTTCAATTATATTCACGAAAGAGGAGTCATTAAAGTTGCAGGAGACCAGATATAAAGGCCTATTTATACTGCTTAGTACATTGGAGCCTGCACATTCAATTCCCTCTTTTTTTCCCCATTTCCATTTCTGTATTTGAAACTGTGTCTACAGCACATCTGATAAGCCCATGAAATATTAAAAACATaaatgtccatgttgaagaccaTGACAGACTACTCTACTCCTTTTTGAAGTATTAGAGCCCTATTTCTGAGGGTAATAAAACATGAATAATTTAGTAAAGGGTTGTTACAACTCTTAATTATGGGCTATTAACACCATTTATAATGAAAAAGACCAATAAGCAGACTCCAAGCAAAAGAAAAGAGGTTTAAAAAGTGTGAGGGTGGAGTGACGTGAACCGTGTGGATTTGGGGGCCCGCGATCCAGGGTCCCGGTCCGTTACACTGAAGAAAATGGCGTTGAATTATTCAGGGACCAGGAGTGCAGCAGAAAGCCTCCAGCGTGTTGGATATAGTATGTGGAGAGACTTCTATACCGGGATCTGGTGACTCATCTCGCTCTGGAGGGAACACAGTTACCTCGTATGACACCAGTGACTGGCGGCGGCACAGGACTTTACAGCACAATGATGCTAGTTCCTTGATATGTGGCTTTTACTTGTTGGTCTAAGAATAGAGGTTTAAACAGGGGGGGGGGACTAAAACTCACATCTATACATATATTGTAAGAAGGTAGGCTCAATAGACATCAAGGATGAACATTTCTAGGTGGTGTCTGTGTTCCAGATCAGAATTAGGTGGCGGTTAGGGCATTTTTATAATGCGGCATGGACAGAGTTTACTGGCGCATCTTTTCTAACCTTGTGGAAACACGGTACTCGGCAAAAGCCCTCCGTCGTAATCATGAAGTGTTGTTGCATTTATCATCTTTGATCATTTAATTTGTCTTCAAAATGTAAGTGCAGgcaattcagaaagtattcagaccccttcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2103587 True 1675 lncRNA 0.42 1 17506223 17507897

Neighbor

gene id symbol gene type direction distance location
LOC110502358 LOC106605838 coding upstream 2572 17488998 ~ 17503651 (+)
LOC110502355 LOC106605823 coding upstream 24468 17452366 ~ 17481755 (+)
LOC118943817 NA coding upstream 36576 17467629 ~ 17469647 (+)
LOC110502352 LOC106605787 coding upstream 102427 17300197 ~ 17403796 (+)
LOC110502351 LOC106605778 coding upstream 276510 17212463 ~ 17229713 (+)
LOC110502359 LOC106605853 coding downstream 164324 17672221 ~ 17704270 (+)
LOC110502364 mea1 coding downstream 213769 17721666 ~ 17724320 (+)
LOC110503055 NA coding downstream 272430 17780327 ~ 17785281 (+)
LOC110502368 LOC106605956 coding downstream 382994 17890891 ~ 17925131 (+)
LOC110502370 NA coding downstream 435440 17943337 ~ 17947408 (+)
G1836994 NA non-coding upstream 154 17505574 ~ 17506069 (+)
G1836991 NA non-coding upstream 1055 17504915 ~ 17505168 (+)
G1836987 NA non-coding upstream 21417 17484245 ~ 17484806 (+)
G1836968 LOC106605805 non-coding upstream 82186 17420367 ~ 17424037 (+)
G1836992 NA non-coding downstream 3930 17511827 ~ 17512017 (+)
G1836998 NA non-coding downstream 10491 17518388 ~ 17518590 (+)
G1836999 NA non-coding downstream 12041 17519938 ~ 17520225 (+)
G1837055 NA non-coding downstream 97778 17605675 ~ 17682965 (+)
G1837123 NA non-coding downstream 187598 17695495 ~ 17712021 (+)
G1836916 NA other upstream 180863 17322174 ~ 17325360 (+)
G1836646 NA other upstream 393396 17112370 ~ 17112827 (+)
G1836321 NA other upstream 612884 16892235 ~ 16893339 (+)
LOC110502341 LOC106605225 other upstream 968991 16534553 ~ 16537430 (+)
LOC110502340 kcng3 other upstream 981397 16519036 ~ 16528382 (+)
LOC100136626 LOC106606089 other downstream 781983 18269654 ~ 18300278 (+)
G1838719 NA other downstream 1440620 18948517 ~ 18949003 (+)
G1839383 NA other downstream 2014367 19522264 ~ 19523012 (+)
LOC110502420 slc18a2 other downstream 2529226 20037044 ~ 20058237 (+)

Expression


Co-expression Network