G1837473


Basic Information

Item Value
gene id G1837473
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 18308389 ~ 18308788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2104130
GTATAGAGGGCTATCGAAAAAGCAGAAAAAGATCATGCAGGTTATGCAAAAATAATGTTAGCAGGAATATGCTGAATGTCCCACATAGGGGTACAGGAGTTCCGGGAGGTGGGCTTGTTGCCTTTGGAGTCCAGAGTGGAGTGGACCAATTTAAACTTAATCATATGTTTGACAACTTAAATGATCATGCCCTAGGTTACATGAAAAACCACATTGATATGGTCTATAACCAACACAGTCACAATACCAGAGCTAGTGTTATGTCTCGTAAAATCCCAAGAGTAAACATTGAGTTTTTCCATGCAGGCATTTGTCTATGGAAAAGCCTTCTCTTGGAGATCAAGCAAATAAAAGTTTTTAATTTGGATAAGGTTGTCTAAGGGAAACCACTCCTCTGCCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2104130 True 400 lncRNA 0.40 1 18308389 18308788

Neighbor

gene id symbol gene type direction distance location
LOC100136626 LOC106606089 coding upstream 8111 18269654 ~ 18300278 (+)
LOC110502377 LOC106606050 coding upstream 66891 18177713 ~ 18241498 (+)
LOC118943922 LOC106606023 coding upstream 154086 18152331 ~ 18154303 (+)
entpd6 enp6 coding upstream 243116 18053919 ~ 18065273 (+)
LOC110502370 NA coding upstream 360981 17943337 ~ 17947408 (+)
LOC110502381 LOC106606107 coding downstream 37796 18346584 ~ 18372006 (+)
LOC118943821 NA coding downstream 424973 18733761 ~ 18737482 (+)
zgc:153169 LOC105005758 coding downstream 477947 18786735 ~ 18805566 (+)
LOC110502392 LOC105005759 coding downstream 497100 18805888 ~ 18819619 (+)
LOC110503087 NA coding downstream 611410 18920198 ~ 18966527 (+)
G1837471 NA non-coding upstream 2800 18305369 ~ 18305589 (+)
G1837469 NA non-coding upstream 3471 18304708 ~ 18304918 (+)
G1837458 NA non-coding upstream 7583 18293699 ~ 18300806 (+)
G1837454 NA non-coding upstream 42340 18265767 ~ 18266049 (+)
G1837446 NA non-coding upstream 50049 18258119 ~ 18258340 (+)
G1837393 NA non-coding downstream 2115 18310903 ~ 18357077 (+)
G1837394 NA non-coding downstream 18145 18326933 ~ 18360904 (+)
G1837401 NA non-coding downstream 64047 18372835 ~ 18373336 (+)
G1837396 NA non-coding downstream 107568 18416356 ~ 18440842 (+)
G1837635 NA non-coding downstream 306115 18614903 ~ 18615237 (+)
G1836916 NA other upstream 983029 17322174 ~ 17325360 (+)
G1836646 NA other upstream 1195562 17112370 ~ 17112827 (+)
G1836321 NA other upstream 1415050 16892235 ~ 16893339 (+)
G1838719 NA other downstream 639729 18948517 ~ 18949003 (+)
G1839383 NA other downstream 1213476 19522264 ~ 19523012 (+)
LOC110502420 slc18a2 other downstream 1728335 20037044 ~ 20058237 (+)
G1839872 NA other downstream 1755056 20062064 ~ 20064987 (+)
LOC110502429 ttc27 other downstream 2050009 20358591 ~ 20516930 (+)

Expression


Co-expression Network