G1838709


Basic Information

Item Value
gene id G1838709
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 18941287 ~ 18941544 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2105481
gccttcaggtgaccaaaagccctgtccaccccagctgaccactgcagtcgcaccggtcccctcttcagcagtgaggtaatgggagctgctacctgaccaaaaccctggataaacctctgtgagtagttggcaaaccctaaaaaccgctgcacctcctttaccgtttTTGGAGTCGACCAATTACGcatggctgaaatgcggtcattctccatctctacccctgACTCGGAAaagcggtaccctaggaaggagatggac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106581772, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2105481 True 258 lncRNA 0.54 1 18941287 18941544

Neighbor

gene id symbol gene type direction distance location
LOC110502397 LOC106608657 coding downstream 30480 18907082 ~ 18910807 (-)
LOC110502395 LOC106606259 coding downstream 80298 18854957 ~ 18860989 (-)
LOC110502394 LOC106606249 coding downstream 87065 18849389 ~ 18854222 (-)
LOC110502393 LOC106606239 coding downstream 112319 18823584 ~ 18828968 (-)
LOC110502390 LOC106606232 coding downstream 153528 18777758 ~ 18787759 (-)
LOC110502401 LOC106606294 coding upstream 141830 19083345 ~ 19092148 (-)
si:dkey-51a16.9 LOC106576688 coding upstream 170414 19111958 ~ 19145332 (-)
LOC110502406 LOC106608672 coding upstream 302751 19244295 ~ 19260880 (-)
LOC110502408 LOC106606370 coding upstream 319526 19261070 ~ 19385465 (-)
LOC110502410 LOC106606442 coding upstream 564286 19505830 ~ 19631049 (-)
G1838628 NA non-coding downstream 135722 18804077 ~ 18805565 (-)
G1838521 NA non-coding downstream 322142 18618299 ~ 18619145 (-)
G1838416 NA non-coding downstream 457498 18466496 ~ 18483789 (-)
LOC110502384 LOC106606127 non-coding downstream 566329 18373928 ~ 18434140 (-)
LOC110502380 syu non-coding downstream 613997 18310906 ~ 18327329 (-)
G1838711 LOC100380853 non-coding upstream 737 18942281 ~ 18943024 (-)
G1838716 NA non-coding upstream 5199 18946743 ~ 18946960 (-)
G1838720 NA non-coding upstream 7209 18948753 ~ 18948980 (-)
G1838778 NA non-coding upstream 9952 18951496 ~ 19016128 (-)
G1838819 NA non-coding upstream 82962 19024506 ~ 19024739 (-)
LOC110502361 LOC106605890 other downstream 1210775 17725263 ~ 17781515 (-)
G1837980 NA other downstream 1222083 17709772 ~ 17719204 (-)
LOC110502353 LOC106605805 other downstream 1515967 17420323 ~ 17425430 (-)
G1835092 NA other downstream 3193552 15745638 ~ 15747735 (-)
G1841694 NA other upstream 2001763 20943307 ~ 20943615 (-)
G1841959 NA other upstream 2403970 21345514 ~ 21371799 (-)
G1843946 NA other upstream 4241443 23182987 ~ 23233423 (-)

Expression


Co-expression Network