G1838719


Basic Information

Item Value
gene id G1838719
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 18948517 ~ 18949003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2105491
caaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgattagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccattgcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctcatcacactgaacacaccatccccactgtcaaacat

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2105491 True 487 TUCP 0.44 1 18948517 18949003

Neighbor

gene id symbol gene type direction distance location
LOC110502392 LOC105005759 coding upstream 128898 18805888 ~ 18819619 (+)
zgc:153169 LOC105005758 coding upstream 142951 18786735 ~ 18805566 (+)
LOC118943821 NA coding upstream 211035 18733761 ~ 18737482 (+)
LOC110502381 LOC106606107 coding upstream 576511 18346584 ~ 18372006 (+)
LOC100136626 LOC106606089 coding upstream 648239 18269654 ~ 18300278 (+)
LOC110502398 LOC106576696 coding downstream 46590 18995593 ~ 19002210 (+)
LOC110502399 LOC106606289 coding downstream 59233 19008236 ~ 19040034 (+)
LOC110502400 NA coding downstream 127474 19076477 ~ 19078412 (+)
LOC110502403 LOC106606339 coding downstream 202182 19151185 ~ 19168638 (+)
calhm3 calhm3 coding downstream 219797 19168800 ~ 19171227 (+)
G1837813 NA non-coding upstream 32827 18915468 ~ 18915690 (+)
G1837798 NA non-coding upstream 56138 18891833 ~ 18892379 (+)
G1837746 NA non-coding upstream 167810 18774519 ~ 18780707 (+)
G1837643 LOC106606172 non-coding upstream 321015 18624374 ~ 18627502 (+)
G1837637 NA non-coding upstream 329238 18618709 ~ 18619279 (+)
G1838727 NA non-coding downstream 8340 18957343 ~ 18959859 (+)
G1838767 NA non-coding downstream 77702 19026705 ~ 19026919 (+)
G1838770 NA non-coding downstream 79382 19028385 ~ 19028646 (+)
G1838771 NA non-coding downstream 80113 19029116 ~ 19029339 (+)
G1838747 NA non-coding downstream 91150 19040153 ~ 19040300 (+)
LOC110502370 NA other upstream 1001142 17943337 ~ 17947408 (+)
G1836916 NA other upstream 1623157 17322174 ~ 17325360 (+)
G1836646 NA other upstream 1835690 17112370 ~ 17112827 (+)
G1836321 NA other upstream 2055178 16892235 ~ 16893339 (+)
G1839383 NA other downstream 573261 19522264 ~ 19523012 (+)
LOC110502420 slc18a2 other downstream 1088120 20037044 ~ 20058237 (+)
G1839872 NA other downstream 1114841 20062064 ~ 20064987 (+)
LOC110502429 ttc27 other downstream 1409794 20358591 ~ 20516930 (+)
G1840558 fbxo28 other downstream 1832862 20781865 ~ 20785203 (+)

Expression


Co-expression Network