G1838770


Basic Information

Item Value
gene id G1838770
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 19028385 ~ 19028646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2105545
gtgcttttggtgacaagccaaatttcttcagcctcctgaggttaaagaggcgctgttgcgccttcttcaccacactgtctgtgtgggtggaccattttagtttgtacgtgatgtgtacgctgaggaacttaaaactttccaccttctccactactgtcccgtcgatgtggataggggggtgctccctttgctgtttcctgaagtccacgatcatctcctttgttttgttttgttgagtgtgaggttgttttcctgacaccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2105545 True 262 lncRNA 0.48 1 19028385 19028646

Neighbor

gene id symbol gene type direction distance location
LOC110502398 LOC106576696 coding upstream 26175 18995593 ~ 19002210 (+)
LOC110503087 NA coding upstream 61858 18920198 ~ 18966527 (+)
LOC110502392 LOC105005759 coding upstream 208766 18805888 ~ 18819619 (+)
zgc:153169 LOC105005758 coding upstream 222819 18786735 ~ 18805566 (+)
LOC118943821 NA coding upstream 290903 18733761 ~ 18737482 (+)
LOC110502400 NA coding downstream 47831 19076477 ~ 19078412 (+)
LOC110502403 LOC106606339 coding downstream 122539 19151185 ~ 19168638 (+)
calhm3 calhm3 coding downstream 140154 19168800 ~ 19171227 (+)
LOC110502405 LOC106606354 coding downstream 165271 19193917 ~ 19226992 (+)
LOC110502412 LOC106606477 coding downstream 469688 19498334 ~ 19505841 (+)
G1838767 NA non-coding upstream 1466 19026705 ~ 19026919 (+)
G1838727 NA non-coding upstream 68526 18957343 ~ 18959859 (+)
G1837813 NA non-coding upstream 112695 18915468 ~ 18915690 (+)
G1837798 NA non-coding upstream 136006 18891833 ~ 18892379 (+)
G1837746 NA non-coding upstream 247678 18774519 ~ 18780707 (+)
G1838771 NA non-coding downstream 470 19029116 ~ 19029339 (+)
G1838747 NA non-coding downstream 11507 19040153 ~ 19040300 (+)
G1838832 NA non-coding downstream 13703 19042349 ~ 19042582 (+)
G1838848 NA non-coding downstream 25042 19053688 ~ 19054079 (+)
G1838856 NA non-coding downstream 28103 19056749 ~ 19056987 (+)
G1838719 NA other upstream 79382 18948517 ~ 18949003 (+)
LOC100136626 LOC106606089 other upstream 728109 18269654 ~ 18300278 (+)
LOC110502370 NA other upstream 1081010 17943337 ~ 17947408 (+)
G1836916 NA other upstream 1703025 17322174 ~ 17325360 (+)
G1836646 NA other upstream 1915558 17112370 ~ 17112827 (+)
G1839383 NA other downstream 493618 19522264 ~ 19523012 (+)
LOC110502420 slc18a2 other downstream 1008477 20037044 ~ 20058237 (+)
G1839872 NA other downstream 1035198 20062064 ~ 20064987 (+)
LOC110502429 ttc27 other downstream 1330151 20358591 ~ 20516930 (+)
G1840558 fbxo28 other downstream 1753219 20781865 ~ 20785203 (+)

Expression


Co-expression Network