XLOC_037623 (creg2)


Basic Information

Item Value
gene id XLOC_037623
gene name creg2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 7228083 ~ 7238839 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073882
TGCGAAATAAACATGCAGTCTGAACGGGCTCGGTGCTCATGAATGTCAACAGCACTATGCTCCTCGTAACTGCGTTAACGGCACTTTTTTGTGTCTGCGAGAGCTACACCATCAGGAGCTCGGTGTCATGGGCTGTTACCGGGGACGCGGCGGATGAGGAGCTGGACACTCACTCGGACGAGGCGCCCGCTGTGCTCGTCGACAACATCGGCATCTGGAAACAGTCCTACCCGTCCTCGGTGTACCGGGACGGGGCTGAGAAGAAGCCCGAGCAGATATCGAAAGGCGAGGATGTGTCGTCCGCGTCCCGTGTGTTCTCATATCGGATGGAGGAGGTGAAGGTGCCGTCCAGCATCCAGACGCCACCGCACGAGGAGACAGCGAGAGTCGCGCGATACATGGCGCATCAGGGGGACTGGGGGTTCCTGTCGACCCTCTCCACTCTTGAGCAGATTAGAGGACTTCCATTTGGCAACATCTTCTCAGTCAGTGACGGTCCAGCAGACAACAGCACTGGTGTTCCTTATTTCTATGTCACGCCAATGGACAACACTGTAACTGACCTCCGCAGCTTCCCTTTTGCTTCCCTAACCTTCTCTGAAGCAGAGGGAGATTTCTGCAGGAAGCAGGTTTATGACCCTGAAGACCCCAGGTGCGCTAGACTCACTTTGACTGGTAAGATGGTGGAGGTGGAACCAGAGGAGCTTGATTTTGCTAAAGAAGCCATGTTCTCCAGGCATCCGGTCATGAAGAAGTGGCCTCCTGGACATCAGTGGTTCTTCATGAAGATGGTTTTGCAGCAAGTTTGGCTTCAGGACTGGTTCGGTGGTGTGTCTGTCGTTCCACTTGAAGAGTATTTCAAAGCAACACCTTTCTGAGGCCAAAACGGCAGCATCCTATCACCAAAAAGCAGAGCTGAACTGATTATTGACAGAAGGTGGTTACGCTCTTCATGCTACTTCCAAaccagctcattctgaaaacgttgccCTATATCTGTTTCTggagcttgcaaattatgtagccagaagtacgtttgGCTACATTTCGTCTTTACTGTAAAAAGAACGCTACGGGGCGTTATGACatcgttccttttctcgcttaccagctgactgcttaccctTGTATGGACGACTTTGTCACTGTTACCAACTTGTCCATTAGCTCGCTGTGTACGTTGGccgacttgagatgcagagaggagttaatCACGATGCGTGTATGGTTTCTAGAAAGttgataagacaaaaacagaagccaaaaaaatgaaataaacaagtaaataactgggtgagaatgtggtaaaacctgaaaacatggtaaaaatcagacgagggcttttcttttctttttttttttttgattgcttttgatatcggttgggtttaggaaactGGGTGTACGccggtcaattggtgcttttgaaaacactattggttgggtttagacaTGGataagggtgggtcagtcgattgttcagtcagtcgacatcggcctctggtgggtttacgtgagatcagcaggtgcgaatggcattaCCAAAAGAAATTTGGGATCTCAAAaagtacacagcgccctctggtggattcacaaaaaactGCTAATAAACGTAGCTCTTGGGACGtatttcacgatctccagaaatttatatagccGTACGTTTTCAGAAAAAGCCTGGGTTGTTCCAAACTGTTTTTTGTTGGTGGTGTTGTTGTTTTGCAGTAAAGCCAGTTCACTGCTTTTGGGTGTTTTTAACAAATTTCCAATATTTGTTGAATGTATGAATTGTTCATTCATGAAGAAAGTCTAgaattattgattaattaaataatccCTCACATACTTAAGGTTACATTGAAAGAAAAGTTATTAATTTGTTATACATAAACATTCAAACCACTCATATTAAATATGTCCACCATTTATGCCTTCACAAAAGTGTGTACTTTATGTACTGAATGCTTTACTACACACACAAAACTATATACCAAATAGAAGTAGAGATTTTAGCCTGATTTCTCTGAAGCTTACTTTACAGTATATATCATTGAAGGTCTGATATTTCATTAATGGCAGAAGTGTGAAATACAAGtcatgtgtgtgtgcaaatttgaTATTCATTGCGTCTGTTGTGTTCAGTTTATGGTCAGAATTGACTTCTCAAGGACGGTGTGTTTATACAGTATGTCAAACTACTTAATACAACTACAATGTAATCGTCAGCTTAATGAAATATCTCAAATAGCTGTTTGTGCCTTGCATTCCCTCCCCACATGAGCTGCtcaaataaaattctaaataaataataggaAATGTTA

Function

symbol description
creg2 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human CREG2 (cellular repressor of E1A stimulated genes 2).

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-041114-173 Predicted to be located in extracellular region. Predicted to be active in extracellular space. Orthologous to human CREG2 (cellular repressor of E1A stimulated genes 2).

Ensembl:

ensembl_id ENSDARG00000000666

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073882 True 2321 mRNA 0.44 4 7228083 7238839

Neighbor

gene id symbol gene type direction distance location
XLOC_037622 mgat4a coding downstream 14311 7091028 ~ 7213772 (-)
XLOC_037621 coa5 coding downstream 138780 7081577 ~ 7089303 (-)
XLOC_037620 slc9a2 coding downstream 236433 6963039 ~ 6991650 (-)
XLOC_037619 tmem182a coding downstream 300496 6915611 ~ 6927587 (-)
XLOC_037618 BX842683.1 coding downstream 510282 6717677 ~ 6717801 (-)
XLOC_037624 si:ch211-121j5.4 coding upstream 2057 7240896 ~ 7257877 (-)
XLOC_037625 mitd1 coding upstream 36346 7275185 ~ 7287375 (-)
XLOC_037626 BX942813.1 coding upstream 118980 7357819 ~ 7359484 (-)
XLOC_037627 slc23a3 coding upstream 133123 7371962 ~ 7378566 (-)
XLOC_037628 slc23a3 coding upstream 151368 7390207 ~ 7390388 (-)
XLOC_037614 NA non-coding downstream 679287 6531549 ~ 6548796 (-)
XLOC_037613 FQ377643.1 non-coding downstream 818812 6409157 ~ 6409271 (-)
XLOC_037602 NA non-coding downstream 2360644 4866100 ~ 4867439 (-)
XLOC_037598 FP102171.1 non-coding downstream 2780979 4443918 ~ 4447104 (-)
XLOC_037631 NA non-coding upstream 260421 7499260 ~ 7505531 (-)
XLOC_037636 NA non-coding upstream 702930 7941769 ~ 7942597 (-)
XLOC_037637 NA non-coding upstream 921502 8160341 ~ 8163995 (-)
XLOC_037638 NA non-coding upstream 1045316 8284155 ~ 8286208 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000037_01890963_01896442 CREG2 coding CI01000037 null 1890963 ~ 1896444 (+)