Gene
RNA
| Item | Value |
|---|---|
| gene id | G1838880 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 19074436 ~ 19074737 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: general transcription factor II-I repeat domain-containing protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2105656 | True | 302 | lncRNA | 0.42 | 1 | 19074436 | 19074737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502397 | LOC106608657 | coding | downstream | 163629 | 18907082 ~ 18910807 (-) |
| LOC110502395 | LOC106606259 | coding | downstream | 213447 | 18854957 ~ 18860989 (-) |
| LOC110502394 | LOC106606249 | coding | downstream | 220214 | 18849389 ~ 18854222 (-) |
| LOC110502393 | LOC106606239 | coding | downstream | 245468 | 18823584 ~ 18828968 (-) |
| LOC110502390 | LOC106606232 | coding | downstream | 286677 | 18777758 ~ 18787759 (-) |
| LOC110502401 | LOC106606294 | coding | upstream | 8637 | 19083345 ~ 19092148 (-) |
| si:dkey-51a16.9 | LOC106576688 | coding | upstream | 37221 | 19111958 ~ 19145332 (-) |
| LOC110502406 | LOC106608672 | coding | upstream | 169558 | 19244295 ~ 19260880 (-) |
| LOC110502408 | LOC106606370 | coding | upstream | 186333 | 19261070 ~ 19385465 (-) |
| LOC110502410 | LOC106606442 | coding | upstream | 431093 | 19505830 ~ 19631049 (-) |
| G1838871 | NA | non-coding | downstream | 8531 | 19065617 ~ 19065905 (-) |
| G1838860 | NA | non-coding | downstream | 15596 | 19058641 ~ 19058840 (-) |
| G1838859 | NA | non-coding | downstream | 15965 | 19058201 ~ 19058471 (-) |
| G1838845 | NA | non-coding | downstream | 23824 | 19050380 ~ 19050612 (-) |
| G1838839 | NA | non-coding | downstream | 27588 | 19046465 ~ 19046848 (-) |
| G1838883 | NA | non-coding | upstream | 962 | 19075699 ~ 19076099 (-) |
| G1839012 | NA | non-coding | upstream | 64750 | 19139487 ~ 19139688 (-) |
| G1839015 | NA | non-coding | upstream | 69839 | 19144576 ~ 19144814 (-) |
| G1839018 | LOC106606339 | non-coding | upstream | 82668 | 19157405 ~ 19157964 (-) |
| LOC110502361 | LOC106605890 | other | downstream | 1343924 | 17725263 ~ 17781515 (-) |
| G1837980 | NA | other | downstream | 1355232 | 17709772 ~ 17719204 (-) |
| LOC110502353 | LOC106605805 | other | downstream | 1649116 | 17420323 ~ 17425430 (-) |
| G1835092 | NA | other | downstream | 3326701 | 15745638 ~ 15747735 (-) |
| G1841694 | NA | other | upstream | 1868570 | 20943307 ~ 20943615 (-) |
| G1841959 | NA | other | upstream | 2270777 | 21345514 ~ 21371799 (-) |
| G1843946 | NA | other | upstream | 4108250 | 23182987 ~ 23233423 (-) |
