Gene
RNA
| Item | Value |
|---|---|
| gene id | G1839340 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 19457007 ~ 19457229 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2106174 | True | 223 | lncRNA | 0.49 | 1 | 19457007 | 19457229 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502408 | LOC106606370 | coding | downstream | 71542 | 19261070 ~ 19385465 (-) |
| LOC110502406 | LOC106608672 | coding | downstream | 196127 | 19244295 ~ 19260880 (-) |
| si:dkey-51a16.9 | LOC106576688 | coding | downstream | 311675 | 19111958 ~ 19145332 (-) |
| LOC110502401 | LOC106606294 | coding | downstream | 364859 | 19083345 ~ 19092148 (-) |
| LOC110502397 | LOC106608657 | coding | downstream | 546200 | 18907082 ~ 18910807 (-) |
| LOC110502410 | LOC106606442 | coding | upstream | 48601 | 19505830 ~ 19631049 (-) |
| hspa12a | LOC106606490 | coding | upstream | 221759 | 19678988 ~ 19725376 (-) |
| LOC110503056 | NA | coding | upstream | 421792 | 19879021 ~ 19881151 (-) |
| LOC100136607 | LOC100136607 | coding | upstream | 434484 | 19891713 ~ 19927867 (-) |
| LOC110502416 | vax1 | coding | upstream | 486806 | 19944035 ~ 19955946 (-) |
| G1839021 | NA | non-coding | downstream | 291390 | 19165246 ~ 19165617 (-) |
| G1839018 | LOC106606339 | non-coding | downstream | 299043 | 19157405 ~ 19157964 (-) |
| G1839015 | NA | non-coding | downstream | 312193 | 19144576 ~ 19144814 (-) |
| G1839012 | NA | non-coding | downstream | 317319 | 19139487 ~ 19139688 (-) |
| G1839343 | NA | non-coding | upstream | 1828 | 19459057 ~ 19459456 (-) |
| G1839567 | NA | non-coding | upstream | 39739 | 19496968 ~ 19497230 (-) |
| G1839571 | NA | non-coding | upstream | 61445 | 19518674 ~ 19518881 (-) |
| G1839641 | NA | non-coding | upstream | 204128 | 19661357 ~ 19661565 (-) |
| LOC110502394 | LOC106606249 | other | downstream | 602835 | 18849389 ~ 18854222 (-) |
| LOC110502361 | LOC106605890 | other | downstream | 1726495 | 17725263 ~ 17781515 (-) |
| G1837980 | NA | other | downstream | 1737803 | 17709772 ~ 17719204 (-) |
| G1841694 | NA | other | upstream | 1486078 | 20943307 ~ 20943615 (-) |
| G1841959 | NA | other | upstream | 1888285 | 21345514 ~ 21371799 (-) |
| G1843946 | NA | other | upstream | 3725758 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | upstream | 3758256 | 23213905 ~ 23218749 (-) |
| LOC110502462 | LOC106607169 | other | upstream | 3887862 | 23344353 ~ 23358461 (-) |
