Gene
RNA
| Item | Value |
|---|---|
| gene id | G1839383 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 19522264 ~ 19523012 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2106218 | True | 416 | TUCP | 0.48 | 2 | 19522264 | 19523012 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502412 | LOC106606477 | coding | upstream | 16423 | 19498334 ~ 19505841 (+) |
| LOC110502405 | LOC106606354 | coding | upstream | 295272 | 19193917 ~ 19226992 (+) |
| calhm3 | calhm3 | coding | upstream | 351037 | 19168800 ~ 19171227 (+) |
| LOC110502403 | LOC106606339 | coding | upstream | 353626 | 19151185 ~ 19168638 (+) |
| LOC110502400 | NA | coding | upstream | 444329 | 19076477 ~ 19078412 (+) |
| LOC110502413 | LOC100136797 | coding | downstream | 117194 | 19640206 ~ 19659354 (+) |
| LOC110503088 | NA | coding | downstream | 146118 | 19669130 ~ 19732445 (+) |
| eno4 | eno4 | coding | downstream | 244733 | 19767745 ~ 19818728 (+) |
| LOC110502418 | pla2g4f | coding | downstream | 414688 | 19937700 ~ 19994896 (+) |
| LOC110502419 | kcnk18 | coding | downstream | 485626 | 20008638 ~ 20031283 (+) |
| G1839382 | NA | non-coding | upstream | 910 | 19520889 ~ 19521354 (+) |
| G1839379 | NA | non-coding | upstream | 6206 | 19515839 ~ 19516058 (+) |
| G1839378 | NA | non-coding | upstream | 7017 | 19515016 ~ 19515247 (+) |
| G1839377 | NA | non-coding | upstream | 7769 | 19513814 ~ 19514495 (+) |
| G1839375 | NA | non-coding | upstream | 9348 | 19512684 ~ 19512916 (+) |
| G1839500 | NA | non-coding | downstream | 145608 | 19668620 ~ 19668835 (+) |
| G1839509 | LOC106606490 | non-coding | downstream | 155998 | 19679010 ~ 19686607 (+) |
| G1839514 | NA | non-coding | downstream | 175832 | 19698844 ~ 19699349 (+) |
| G1838719 | NA | other | upstream | 573261 | 18948517 ~ 18949003 (+) |
| LOC100136626 | LOC106606089 | other | upstream | 1221988 | 18269654 ~ 18300278 (+) |
| LOC110502370 | NA | other | upstream | 1574889 | 17943337 ~ 17947408 (+) |
| G1836916 | NA | other | upstream | 2196904 | 17322174 ~ 17325360 (+) |
| G1836646 | NA | other | upstream | 2409437 | 17112370 ~ 17112827 (+) |
| LOC110502420 | slc18a2 | other | downstream | 514111 | 20037044 ~ 20058237 (+) |
| G1839872 | NA | other | downstream | 540832 | 20062064 ~ 20064987 (+) |
| LOC110502429 | ttc27 | other | downstream | 835785 | 20358591 ~ 20516930 (+) |
| G1840558 | fbxo28 | other | downstream | 1258853 | 20781865 ~ 20785203 (+) |
| G1844044 | LOC106607169 | other | downstream | 3822032 | 23345044 ~ 23346489 (+) |
