G1839765


Basic Information

Item Value
gene id G1839765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 19857585 ~ 19857858 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2106631
atttgagattcttcaaagttgccaccatttgccttgatgacagctttgtgcaCTCTTGAaatcctctcaaccagcttcatgaggtagtcacctggaatgcatttcaattaacaggtgtgccttattaaaagttaatttgtgcaacttctttcattcttaattaaggatccgcccctttctTCAATTTTCGCCTGAAatgacatactcaaatctaactgcctgtagctcaggccctgaagcaaggatatgcatattcttggtaccaattgaaatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2106631 True 274 lncRNA 0.39 1 19857585 19857858

Neighbor

gene id symbol gene type direction distance location
eno4 eno4 coding upstream 38857 19767745 ~ 19818728 (+)
LOC110503088 NA coding upstream 185130 19669130 ~ 19732445 (+)
LOC110502413 LOC100136797 coding upstream 198231 19640206 ~ 19659354 (+)
LOC110502412 LOC106606477 coding upstream 351744 19498334 ~ 19505841 (+)
LOC110502405 LOC106606354 coding upstream 630593 19193917 ~ 19226992 (+)
LOC110502418 pla2g4f coding downstream 79842 19937700 ~ 19994896 (+)
LOC110502419 kcnk18 coding downstream 150780 20008638 ~ 20031283 (+)
LOC110502420 slc18a2 coding downstream 179186 20037044 ~ 20058237 (+)
LOC110502423 LOC106606565 coding downstream 289749 20147607 ~ 20156413 (+)
LOC110502425 LOC106606648 coding downstream 346620 20204478 ~ 20207839 (+)
G1839760 NA non-coding upstream 2827 19854529 ~ 19854758 (+)
G1839753 NA non-coding upstream 10933 19846438 ~ 19846652 (+)
G1839723 NA non-coding upstream 59472 19796185 ~ 19798113 (+)
G1839694 NA non-coding upstream 111663 19745570 ~ 19745922 (+)
G1839747 NA non-coding downstream 33826 19891684 ~ 19892614 (+)
G1839872 NA non-coding downstream 204206 20062064 ~ 20064987 (+)
G1840104 NA non-coding downstream 222650 20080508 ~ 20080832 (+)
G1840108 NA non-coding downstream 226190 20084048 ~ 20084400 (+)
G1840116 NA non-coding downstream 237460 20095318 ~ 20095694 (+)
G1839383 NA other upstream 334573 19522264 ~ 19523012 (+)
G1838719 NA other upstream 908582 18948517 ~ 18949003 (+)
LOC100136626 LOC106606089 other upstream 1557309 18269654 ~ 18300278 (+)
LOC110502370 NA other upstream 1910210 17943337 ~ 17947408 (+)
G1836916 NA other upstream 2532225 17322174 ~ 17325360 (+)
LOC110502429 ttc27 other downstream 500939 20358591 ~ 20516930 (+)
G1840558 fbxo28 other downstream 924007 20781865 ~ 20785203 (+)
G1844044 LOC106607169 other downstream 3487186 23345044 ~ 23346489 (+)

Expression


Co-expression Network