G1840167


Basic Information

Item Value
gene id G1840167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 20065554 ~ 20067364 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2107068
TATAAATGCTCTGTGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGTGCAGTTAGGATGTTATAAATGCTCTGTGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGTGCAGTTAGGATGTTATAAATGCTCTGTGCAGTTAGGATGTTATAAATGCTCTGTGCAGTTAGGATGTTATAAATGCTCTGAGCAGTTAGGATGTTATAAATGCTCTGTGCAGTTAGGATGGGGGGATTTTTAGGGTAAAGTTCAAATAAAGAGAGCATTATTCTCTTCTCAAGGGGCCCAAATCCTCTGGATAGGATCAGTATGACATGTATTCTGTTCTCACCAAGCTAATTTATATCGCAGTGTACTTCTGTGGCTGTGCTGCCATTTGCTTCAGCACAGGACCAGAGCTGGTTAAAAGCAGGACTTTTGGGGTCAGACAGGAGGACAATATACAAGGTGTGAAGGGGAAAGGAAGCAAAGCAAAAAATGTCTGTGCAATAGACGTGATGCTCTTCTAGATACTGTCTTGGCTGCTACTTGTTGATCTCTCTTCAATTGTTGTATATTCATATTTTTGTAGGAAATAAAGACAAATGTGATAATCAGGAAGGGAATCTTCAGTTTGCAATCTCTCCTTTTCAGTTTCTCGTTGTTTCTCTCCGACGCAAAAAAATATCTGCCGTAGTTTAAGGGTCAGTTAGGTAACTTGGGGGACCCTGGGCTGGAATTGGGCTCATGAGGAGagtaaacaaaaaacatttttggtCTGTGTCTTGCTACTTCCATTACTACTGCTGCAGCTATTGTACATCTGTGCTCTCTAATCCCATTCATAcgctgtttatctctctccccacGATTCACATCGTGTTATGGCGTTCTGCTTTTGTGATTTGTTTTGTAAGAGGGATGTTGTACACAGTTCTAGAGGTGGATCATGTGATGAAGCGCTATTGTACATAGCCTCAATAAACAAGCTCA

Function

NR:

description
PREDICTED: dentin sialophosphoprotein-like, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2107068 True 1121 lncRNA 0.40 2 20065554 20067364

Neighbor

gene id symbol gene type direction distance location
LOC110502416 vax1 coding downstream 109608 19944035 ~ 19955946 (-)
LOC100136607 LOC100136607 coding downstream 137687 19891713 ~ 19927867 (-)
LOC110503056 NA coding downstream 184403 19879021 ~ 19881151 (-)
hspa12a LOC106606490 coding downstream 340178 19678988 ~ 19725376 (-)
LOC110502410 LOC106606442 coding downstream 434505 19505830 ~ 19631049 (-)
LOC110502421 pdzd8 coding upstream 1833 20069197 ~ 20136003 (-)
LOC110502422 LOC106606541 coding upstream 89039 20156403 ~ 20169212 (-)
LOC110502426 NA coding upstream 234929 20302293 ~ 20306390 (-)
LOC110502434 LOC106606739 coding upstream 697817 20765181 ~ 20774451 (-)
LOC110502435 LOC106606749 coding upstream 713416 20780780 ~ 20795640 (-)
G1840096 NA non-coding downstream 3539 20061296 ~ 20062015 (-)
G1839974 NA non-coding downstream 205301 19860017 ~ 19860253 (-)
G1839962 NA non-coding downstream 220210 19844927 ~ 19845344 (-)
G1839917 NA non-coding downstream 251289 19776227 ~ 19814265 (-)
G1839919 NA non-coding downstream 283519 19778916 ~ 19782035 (-)
G1840170 NA non-coding upstream 163 20067527 ~ 20067952 (-)
G1840169 NA non-coding upstream 653 20068017 ~ 20068926 (-)
G1840171 NA non-coding upstream 6411 20073775 ~ 20074013 (-)
G1840173 NA non-coding upstream 7450 20074814 ~ 20075026 (-)
LOC110502408 LOC106606370 other downstream 680512 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 944211 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 1211382 18849389 ~ 18854222 (-)
LOC110502361 LOC106605890 other downstream 2335042 17725263 ~ 17781515 (-)
G1837980 NA other downstream 2346350 17709772 ~ 17719204 (-)
G1841694 NA other upstream 875943 20943307 ~ 20943615 (-)
G1841959 NA other upstream 1278150 21345514 ~ 21371799 (-)
G1843946 NA other upstream 3115623 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other upstream 3148121 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 other upstream 3277727 23344353 ~ 23358461 (-)

Expression


Co-expression Network