Gene
RNA
| Item | Value |
|---|---|
| gene id | G1840171 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 20073775 ~ 20074013 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2107072 | True | 239 | lncRNA | 0.39 | 1 | 20073775 | 20074013 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502416 | vax1 | coding | downstream | 117829 | 19944035 ~ 19955946 (-) |
| LOC100136607 | LOC100136607 | coding | downstream | 145908 | 19891713 ~ 19927867 (-) |
| LOC110503056 | NA | coding | downstream | 192624 | 19879021 ~ 19881151 (-) |
| hspa12a | LOC106606490 | coding | downstream | 348399 | 19678988 ~ 19725376 (-) |
| LOC110502410 | LOC106606442 | coding | downstream | 442726 | 19505830 ~ 19631049 (-) |
| LOC110502422 | LOC106606541 | coding | upstream | 82390 | 20156403 ~ 20169212 (-) |
| LOC110502426 | NA | coding | upstream | 228280 | 20302293 ~ 20306390 (-) |
| LOC110502434 | LOC106606739 | coding | upstream | 691168 | 20765181 ~ 20774451 (-) |
| LOC110502435 | LOC106606749 | coding | upstream | 706767 | 20780780 ~ 20795640 (-) |
| polr1c | rpac1 | coding | upstream | 722157 | 20796170 ~ 20801471 (-) |
| LOC110502421 | pdzd8 | non-coding | downstream | 4024 | 20069197 ~ 20136003 (-) |
| G1840169 | NA | non-coding | downstream | 4849 | 20068017 ~ 20068926 (-) |
| G1840170 | NA | non-coding | downstream | 5823 | 20067527 ~ 20067952 (-) |
| G1840167 | NA | non-coding | downstream | 6411 | 20065554 ~ 20067364 (-) |
| G1840096 | NA | non-coding | downstream | 11760 | 20061296 ~ 20062015 (-) |
| G1840173 | NA | non-coding | upstream | 801 | 20074814 ~ 20075026 (-) |
| G1840185 | NA | non-coding | upstream | 15726 | 20089739 ~ 20090077 (-) |
| G1840192 | NA | non-coding | upstream | 26359 | 20100372 ~ 20100575 (-) |
| G1840198 | NA | non-coding | upstream | 30788 | 20104801 ~ 20105047 (-) |
| G1840207 | NA | non-coding | upstream | 43056 | 20117069 ~ 20117378 (-) |
| LOC110502408 | LOC106606370 | other | downstream | 688733 | 19261070 ~ 19385465 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | downstream | 952432 | 19111958 ~ 19145332 (-) |
| LOC110502394 | LOC106606249 | other | downstream | 1219603 | 18849389 ~ 18854222 (-) |
| LOC110502361 | LOC106605890 | other | downstream | 2343263 | 17725263 ~ 17781515 (-) |
| G1837980 | NA | other | downstream | 2354571 | 17709772 ~ 17719204 (-) |
| G1841694 | NA | other | upstream | 869294 | 20943307 ~ 20943615 (-) |
| G1841959 | NA | other | upstream | 1271501 | 21345514 ~ 21371799 (-) |
| G1843946 | NA | other | upstream | 3108974 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | upstream | 3141472 | 23213905 ~ 23218749 (-) |
| LOC110502462 | LOC106607169 | other | upstream | 3271078 | 23344353 ~ 23358461 (-) |
