Gene
RNA
| Item | Value |
|---|---|
| gene id | G1840143 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 20139775 ~ 20139997 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2107044 | True | 223 | lncRNA | 0.46 | 1 | 20139775 | 20139997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502420 | slc18a2 | coding | upstream | 81538 | 20037044 ~ 20058237 (+) |
| LOC110502419 | kcnk18 | coding | upstream | 108492 | 20008638 ~ 20031283 (+) |
| LOC110502418 | pla2g4f | coding | upstream | 144879 | 19937700 ~ 19994896 (+) |
| eno4 | eno4 | coding | upstream | 321047 | 19767745 ~ 19818728 (+) |
| LOC110503088 | NA | coding | upstream | 467320 | 19669130 ~ 19732445 (+) |
| LOC110502423 | LOC106606565 | coding | downstream | 7610 | 20147607 ~ 20156413 (+) |
| LOC110502425 | LOC106606648 | coding | downstream | 64481 | 20204478 ~ 20207839 (+) |
| LOC110502424 | LOC106606575 | coding | downstream | 68621 | 20208618 ~ 20349384 (+) |
| LOC110502429 | ttc27 | coding | downstream | 218594 | 20358591 ~ 20516930 (+) |
| LOC110502431 | ltbp1 | coding | downstream | 378814 | 20518811 ~ 20662857 (+) |
| G1840140 | pdzd8 | non-coding | upstream | 4376 | 20134414 ~ 20135399 (+) |
| G1840137 | NA | non-coding | upstream | 9860 | 20129566 ~ 20129915 (+) |
| G1840131 | NA | non-coding | upstream | 19186 | 20120240 ~ 20120589 (+) |
| G1840130 | NA | non-coding | upstream | 19859 | 20119686 ~ 20119916 (+) |
| G1840128 | NA | non-coding | upstream | 23336 | 20116240 ~ 20116439 (+) |
| G1840156 | NA | non-coding | downstream | 8547 | 20148544 ~ 20148833 (+) |
| G1840244 | NA | non-coding | downstream | 35102 | 20175099 ~ 20175299 (+) |
| G1840349 | NA | non-coding | downstream | 239326 | 20379323 ~ 20384284 (+) |
| G1840350 | NA | non-coding | downstream | 241152 | 20381149 ~ 20386136 (+) |
| G1839872 | NA | other | upstream | 74788 | 20062064 ~ 20064987 (+) |
| G1839383 | NA | other | upstream | 616763 | 19522264 ~ 19523012 (+) |
| G1838719 | NA | other | upstream | 1190772 | 18948517 ~ 18949003 (+) |
| LOC100136626 | LOC106606089 | other | upstream | 1839499 | 18269654 ~ 18300278 (+) |
| G1840558 | fbxo28 | other | downstream | 641868 | 20781865 ~ 20785203 (+) |
| G1844044 | LOC106607169 | other | downstream | 3205047 | 23345044 ~ 23346489 (+) |
| G1845108 | NA | other | downstream | 4186267 | 24326264 ~ 24354246 (+) |
| G1849208 | LOC106607606 | other | downstream | 7134341 | 27274338 ~ 27276259 (+) |
