Gene
RNA
| Item | Value |
|---|---|
| gene id | G1840349 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 20379323 ~ 20384284 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2107265 | True | 256 | lncRNA | 0.43 | 2 | 20379323 | 20384284 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502424 | LOC106606575 | coding | upstream | 29939 | 20208618 ~ 20349384 (+) |
| LOC110502425 | LOC106606648 | coding | upstream | 171484 | 20204478 ~ 20207839 (+) |
| LOC110502423 | LOC106606565 | coding | upstream | 222910 | 20147607 ~ 20156413 (+) |
| LOC110502420 | slc18a2 | coding | upstream | 321086 | 20037044 ~ 20058237 (+) |
| LOC110502419 | kcnk18 | coding | upstream | 348040 | 20008638 ~ 20031283 (+) |
| LOC110502431 | ltbp1 | coding | downstream | 134527 | 20518811 ~ 20662857 (+) |
| LOC110502432 | LOC106606711 | coding | downstream | 288130 | 20672414 ~ 20718831 (+) |
| LOC110503089 | LOC104962710 | coding | downstream | 356777 | 20741061 ~ 20748299 (+) |
| LOC118943881 | NA | coding | downstream | 364614 | 20748898 ~ 20752252 (+) |
| LOC110502437 | LOC106606755 | coding | downstream | 417219 | 20801503 ~ 20803802 (+) |
| G1840244 | NA | non-coding | upstream | 204024 | 20175099 ~ 20175299 (+) |
| G1840156 | NA | non-coding | upstream | 230490 | 20148544 ~ 20148833 (+) |
| G1840143 | NA | non-coding | upstream | 239326 | 20139775 ~ 20139997 (+) |
| G1840140 | pdzd8 | non-coding | upstream | 243924 | 20134414 ~ 20135399 (+) |
| LOC110502429 | ttc27 | non-coding | downstream | 26738 | 20358591 ~ 20516930 (+) |
| G1840333 | NA | non-coding | downstream | 28774 | 20413058 ~ 20413506 (+) |
| G1840546 | NA | non-coding | downstream | 375688 | 20759972 ~ 20760195 (+) |
| G1840547 | NA | non-coding | downstream | 377283 | 20761567 ~ 20761991 (+) |
| G1839872 | NA | other | upstream | 314336 | 20062064 ~ 20064987 (+) |
| G1839383 | NA | other | upstream | 856311 | 19522264 ~ 19523012 (+) |
| G1838719 | NA | other | upstream | 1430320 | 18948517 ~ 18949003 (+) |
| LOC100136626 | LOC106606089 | other | upstream | 2079047 | 18269654 ~ 18300278 (+) |
| G1840558 | fbxo28 | other | downstream | 397581 | 20781865 ~ 20785203 (+) |
| G1844044 | LOC106607169 | other | downstream | 2960760 | 23345044 ~ 23346489 (+) |
| G1845108 | NA | other | downstream | 3941980 | 24326264 ~ 24354246 (+) |
| G1849208 | LOC106607606 | other | downstream | 6890054 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 7605990 | 27990245 ~ 27993189 (+) |
