Gene
RNA
| Item | Value |
|---|---|
| gene id | G1841394 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 20394056 ~ 20411811 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2108440 | True | 250 | lncRNA | 0.49 | 2 | 20394056 | 20411811 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502426 | NA | coding | downstream | 87666 | 20302293 ~ 20306390 (-) |
| LOC110502422 | LOC106606541 | coding | downstream | 224844 | 20156403 ~ 20169212 (-) |
| LOC110502421 | pdzd8 | coding | downstream | 258053 | 20069197 ~ 20136003 (-) |
| LOC110502416 | vax1 | coding | downstream | 438110 | 19944035 ~ 19955946 (-) |
| LOC100136607 | LOC100136607 | coding | downstream | 466189 | 19891713 ~ 19927867 (-) |
| LOC110502434 | LOC106606739 | coding | upstream | 353370 | 20765181 ~ 20774451 (-) |
| LOC110502435 | LOC106606749 | coding | upstream | 368969 | 20780780 ~ 20795640 (-) |
| polr1c | rpac1 | coding | upstream | 384359 | 20796170 ~ 20801471 (-) |
| si:dkey-191g9.7 | LOC106606765 | coding | upstream | 398326 | 20810137 ~ 20815145 (-) |
| LOC110502440 | LOC106606775 | coding | upstream | 420690 | 20832501 ~ 20849619 (-) |
| G1840283 | NA | non-coding | downstream | 190829 | 20203004 ~ 20203227 (-) |
| G1840248 | NA | non-coding | downstream | 217365 | 20176480 ~ 20176691 (-) |
| G1840194 | LOC106606565 | non-coding | downstream | 237844 | 20154684 ~ 20156212 (-) |
| G1840218 | NA | non-coding | downstream | 263492 | 20129973 ~ 20130564 (-) |
| G1841470 | ltbp1 | non-coding | upstream | 240978 | 20652789 ~ 20658335 (-) |
| G1841547 | NA | non-coding | upstream | 265004 | 20676815 ~ 20707882 (-) |
| G1841610 | NA | non-coding | upstream | 392576 | 20804387 ~ 20804679 (-) |
| G1841612 | NA | non-coding | upstream | 394805 | 20806616 ~ 20806961 (-) |
| G1841614 | NA | non-coding | upstream | 396432 | 20808243 ~ 20808453 (-) |
| LOC110502408 | LOC106606370 | other | downstream | 1009014 | 19261070 ~ 19385465 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | downstream | 1272713 | 19111958 ~ 19145332 (-) |
| LOC110502394 | LOC106606249 | other | downstream | 1539884 | 18849389 ~ 18854222 (-) |
| LOC110502361 | LOC106605890 | other | downstream | 2663544 | 17725263 ~ 17781515 (-) |
| G1837980 | NA | other | downstream | 2674852 | 17709772 ~ 17719204 (-) |
| G1841694 | NA | other | upstream | 531496 | 20943307 ~ 20943615 (-) |
| G1841959 | NA | other | upstream | 933703 | 21345514 ~ 21371799 (-) |
| G1843946 | NA | other | upstream | 2771176 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | upstream | 2803674 | 23213905 ~ 23218749 (-) |
| LOC110502462 | LOC106607169 | other | upstream | 2933280 | 23344353 ~ 23358461 (-) |
