Gene
RNA
| Item | Value |
|---|---|
| gene id | G1841740 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 21000121 ~ 21000359 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2108806 | True | 239 | lncRNA | 0.41 | 1 | 21000121 | 21000359 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502440 | LOC106606775 | coding | downstream | 150502 | 20832501 ~ 20849619 (-) |
| si:dkey-191g9.7 | LOC106606765 | coding | downstream | 184976 | 20810137 ~ 20815145 (-) |
| polr1c | rpac1 | coding | downstream | 198650 | 20796170 ~ 20801471 (-) |
| LOC110502435 | LOC106606749 | coding | downstream | 204481 | 20780780 ~ 20795640 (-) |
| LOC110502434 | LOC106606739 | coding | downstream | 225670 | 20765181 ~ 20774451 (-) |
| LOC110502444 | LOC106606853 | coding | upstream | 144281 | 21144640 ~ 21285931 (-) |
| LOC110502445 | NA | coding | upstream | 298235 | 21298594 ~ 21304431 (-) |
| LOC110502447 | LOC106606998 | coding | upstream | 512612 | 21512971 ~ 21516875 (-) |
| LOC110502449 | LOC106607006 | coding | upstream | 523375 | 21523734 ~ 21528655 (-) |
| LOC110502450 | LOC106607022 | coding | upstream | 559641 | 21560000 ~ 21604318 (-) |
| G1841735 | NA | non-coding | downstream | 4546 | 20994967 ~ 20995575 (-) |
| G1841731 | NA | non-coding | downstream | 10543 | 20989352 ~ 20989578 (-) |
| G1841726 | NA | non-coding | downstream | 19956 | 20979944 ~ 20980165 (-) |
| G1841713 | NA | non-coding | downstream | 34761 | 20965150 ~ 20965360 (-) |
| G1841712 | NA | non-coding | downstream | 35506 | 20964396 ~ 20964615 (-) |
| G1841741 | LOC106581475 | non-coding | upstream | 455 | 21000814 ~ 21001062 (-) |
| G1841752 | NA | non-coding | upstream | 18121 | 21018480 ~ 21018740 (-) |
| G1841754 | NA | non-coding | upstream | 19054 | 21019413 ~ 21019640 (-) |
| G1841755 | NA | non-coding | upstream | 19351 | 21019710 ~ 21019915 (-) |
| G1841759 | NA | non-coding | upstream | 27693 | 21028052 ~ 21028307 (-) |
| G1841694 | NA | other | downstream | 56506 | 20943307 ~ 20943615 (-) |
| LOC110502408 | LOC106606370 | other | downstream | 1615079 | 19261070 ~ 19385465 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | downstream | 1878778 | 19111958 ~ 19145332 (-) |
| LOC110502394 | LOC106606249 | other | downstream | 2145949 | 18849389 ~ 18854222 (-) |
| LOC110502361 | LOC106605890 | other | downstream | 3269609 | 17725263 ~ 17781515 (-) |
| G1841959 | NA | other | upstream | 345155 | 21345514 ~ 21371799 (-) |
| G1843946 | NA | other | upstream | 2182628 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | upstream | 2215126 | 23213905 ~ 23218749 (-) |
| LOC110502462 | LOC106607169 | other | upstream | 2344732 | 23344353 ~ 23358461 (-) |
| G1846858 | NA | other | upstream | 4439448 | 25439807 ~ 25440387 (-) |
