XLOC_037638



Basic Information


Item Value
gene id XLOC_037638
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 8284155 ~ 8286208 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075294
cactatggAGCCCTctatgcagcagccaagaaaaagGTGTAATGGACTGGCAGACTGTGTGTTTACCAATGAGAAACTTAAAACCGAGGATAAATGTCTTTCATCCTACAAAATCAATTGTAGCTTGTGAAGGTGACCAAATTGACTTGGAATGGGCAACATAGGAGATCTGATCTCAAGGACTTCTAATAACCGTCAGCATCTCCACATTGGCTACACCAAACCGAAAATACTTCCCATATCTTTAACTAAGTAATTGTTACAAAAAGAAATCCTACACAACTGACTTTAGTCAACCATGACTGCTCTTGACTTGCTGGCGTACTTTAGCCATAGCACATAACTCTGGCTATCAAAAAGGAGATCTGTTCACCAGCTTTTGACTTGCTACAATAAATTCAAGGTT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075294 True 406 lncRNA 0.40 4 8284155 8286208

Neighbor


gene id symbol gene type direction distance location
XLOC_037637 NA coding downstream 120160 8160341 ~ 8163995 (-)
XLOC_037636 NA coding downstream 341558 7941769 ~ 7942597 (-)
XLOC_037635 si:ch73-199e17.1 coding downstream 600153 7678136 ~ 7684002 (-)
XLOC_037634 tuba8l3 coding downstream 610299 7662638 ~ 7673856 (-)
XLOC_037633 dnajb2 coding downstream 628854 7621622 ~ 7655301 (-)
XLOC_037639 si:ch211-145c1.1 coding upstream 2060 8288268 ~ 8314028 (-)
XLOC_037640 irs2b coding upstream 143031 8429239 ~ 8454060 (-)
XLOC_037641 col4a1 coding upstream 348021 8634229 ~ 8670158 (-)
XLOC_037642 rab20 coding upstream 601320 8887528 ~ 8895243 (-)
XLOC_037643 ing1 coding upstream 686872 8973080 ~ 8979468 (-)
XLOC_037631 NA non-coding downstream 778624 7499260 ~ 7505531 (-)
XLOC_037626 BX942813.1 non-coding downstream 924671 7357819 ~ 7359484 (-)
XLOC_037618 BX842683.1 non-coding downstream 1566354 6717677 ~ 6717801 (-)
XLOC_037644 BX537313.1 non-coding upstream 722915 9009123 ~ 9024269 (-)
XLOC_037645 NA non-coding upstream 740175 9026383 ~ 9050515 (-)
XLOC_037649 NA non-coding upstream 1000211 9286419 ~ 9289070 (-)
XLOC_037651 AL954142.4 non-coding upstream 1069164 9355372 ~ 9370866 (-)
XLOC_037663 NA non-coding upstream 2082172 10368380 ~ 10370625 (-)

Expression



Co-expression Network