G1841959


Basic Information

Item Value
gene id G1841959
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 21345514 ~ 21371799 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2109040
tttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacagggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccagatttggatacaaaaagatttcccaagctttaaaaatcccaaggagcactgtgcaaacgatattattgaaatggaaggagtatcagaccactgcaaatctaccaagacctgtccgtccctctaaactttcagctcattcaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagattctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtctttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaatgtaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacgtgatggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2109040 True 1028 TUCP 0.42 2 21345514 21371799

Neighbor

gene id symbol gene type direction distance location
LOC110502445 NA coding downstream 41083 21298594 ~ 21304431 (-)
LOC110502444 LOC106606853 coding downstream 59583 21144640 ~ 21285931 (-)
LOC110502440 LOC106606775 coding downstream 495895 20832501 ~ 20849619 (-)
si:dkey-191g9.7 LOC106606765 coding downstream 530369 20810137 ~ 20815145 (-)
polr1c rpac1 coding downstream 544043 20796170 ~ 20801471 (-)
LOC110502447 LOC106606998 coding upstream 141172 21512971 ~ 21516875 (-)
LOC110502449 LOC106607006 coding upstream 151935 21523734 ~ 21528655 (-)
LOC110502450 LOC106607022 coding upstream 188201 21560000 ~ 21604318 (-)
LOC118943877 LOC106607043 coding upstream 288659 21660458 ~ 21663289 (-)
LOC110502452 LOC106607058 coding upstream 306401 21678200 ~ 21822311 (-)
G1841909 NA non-coding downstream 17228 21260825 ~ 21328286 (-)
G1841823 NA non-coding downstream 233096 21112208 ~ 21112418 (-)
G1841819 NA non-coding downstream 237411 21107896 ~ 21108103 (-)
G1841811 NA non-coding downstream 249230 21095858 ~ 21096284 (-)
G1841803 NA non-coding downstream 260443 21084851 ~ 21085071 (-)
G1842008 NA non-coding upstream 55663 21427462 ~ 21427887 (-)
G1842039 NA non-coding upstream 89157 21460956 ~ 21462159 (-)
G1842145 NA non-coding upstream 276447 21648246 ~ 21651632 (-)
G1842169 NA non-coding upstream 314282 21686081 ~ 21686343 (-)
G1842170 NA non-coding upstream 317497 21689296 ~ 21689536 (-)
G1841694 NA other downstream 401899 20943307 ~ 20943615 (-)
LOC110502408 LOC106606370 other downstream 1960472 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 2224171 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 2491342 18849389 ~ 18854222 (-)
LOC110502361 LOC106605890 other downstream 3615002 17725263 ~ 17781515 (-)
G1843946 NA other upstream 1811188 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other upstream 1843686 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 other upstream 1973292 23344353 ~ 23358461 (-)
G1846858 NA other upstream 4068008 25439807 ~ 25440387 (-)
G1850441 NA other upstream 6703126 28074925 ~ 28078251 (-)

Expression


Co-expression Network