G1841964


Basic Information

Item Value
gene id G1841964
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 21354681 ~ 21382261 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2109045
gaattttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgtagattttgctttaagttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaaaaaagcaggcccaaaccatgatgctgccaccatcacgtttgacagtggggattgtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaagacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2109045 True 526 lncRNA 0.43 2 21354681 21382261

Neighbor

gene id symbol gene type direction distance location
LOC110502445 NA coding downstream 50250 21298594 ~ 21304431 (-)
LOC110502444 LOC106606853 coding downstream 68750 21144640 ~ 21285931 (-)
LOC110502440 LOC106606775 coding downstream 505062 20832501 ~ 20849619 (-)
si:dkey-191g9.7 LOC106606765 coding downstream 539536 20810137 ~ 20815145 (-)
polr1c rpac1 coding downstream 553210 20796170 ~ 20801471 (-)
LOC110502447 LOC106606998 coding upstream 130710 21512971 ~ 21516875 (-)
LOC110502449 LOC106607006 coding upstream 141473 21523734 ~ 21528655 (-)
LOC110502450 LOC106607022 coding upstream 177739 21560000 ~ 21604318 (-)
LOC118943877 LOC106607043 coding upstream 278197 21660458 ~ 21663289 (-)
LOC110502452 LOC106607058 coding upstream 295939 21678200 ~ 21822311 (-)
G1841909 NA non-coding downstream 26395 21260825 ~ 21328286 (-)
G1841823 NA non-coding downstream 242263 21112208 ~ 21112418 (-)
G1841819 NA non-coding downstream 246578 21107896 ~ 21108103 (-)
G1841811 NA non-coding downstream 258397 21095858 ~ 21096284 (-)
G1841803 NA non-coding downstream 269610 21084851 ~ 21085071 (-)
G1842008 NA non-coding upstream 45201 21427462 ~ 21427887 (-)
G1842039 NA non-coding upstream 78695 21460956 ~ 21462159 (-)
G1842145 NA non-coding upstream 265985 21648246 ~ 21651632 (-)
G1842169 NA non-coding upstream 303820 21686081 ~ 21686343 (-)
G1842170 NA non-coding upstream 307035 21689296 ~ 21689536 (-)
G1841694 NA other downstream 411066 20943307 ~ 20943615 (-)
LOC110502408 LOC106606370 other downstream 1969639 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 2233338 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 2500509 18849389 ~ 18854222 (-)
LOC110502361 LOC106605890 other downstream 3624169 17725263 ~ 17781515 (-)
G1843946 NA other upstream 1800726 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other upstream 1833224 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 other upstream 1962830 23344353 ~ 23358461 (-)
G1846858 NA other upstream 4057546 25439807 ~ 25440387 (-)
G1850441 NA other upstream 6692664 28074925 ~ 28078251 (-)

Expression


Co-expression Network