XLOC_037645


Basic Information

Item Value
gene id XLOC_037645
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 9026383 ~ 9050515 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075297
GTGAAAGATGAACAGGTGCTTAAAATCTCATTCATCCTGTCAAGAATAAAATTCAtcatattttgtcatattttgtgTCATATTTTGGTTCTCAAAGTGGGAGCAAGATGTCCTCACTGCAGCCTGCAGCTTGATGATGTAGGAAGTCGTTAACTACAtagtggaccttgtaccgccTACTAAGtcaactcctctcctctcctcAAGTCCTCCAACGTACATGGTGATCTACTGGGCAAACTGGAACCGTGAAAAATCCAtctacatggagCAGTGATGTGAAAAGCATTTTCCTGGTCCTCTCCCTTGGGCAGAGTGAATCTTCACAGTCAAAGCTGGTATAAATATTTAACCCCCCTCCTGATGGGGTCACCCTGACCCAGGGCTTCTGGGTCTTCACACAGGCCCGGATGGTTCCTGTCATGCGCATAATGCAGCAGAGAGTGTGCATGACCCGACACCGTCCACAGAGACCTCACACGACAAATGAACACACAAGTCAGCTGATACATTGACCTGATGGCCTCGTCTCTCAAACATCTGGATGCTCGCAGTGCAGTCGCAGCAGGCTGAACGTCTCAGTTCATCCCCATTGGctacatttcacacacacacacacacacaatctgtgACATTTACGCAAGGCAGATGAAACACATGCACAGAACCCAGCAGGGAGGCTTATCATGAGTGAAATGAAGCAATAAGAGACACTGTGACGGCAAAAgacctttttttatttgtgttagtgtgtgtctgtgtgcatttgGACACACACATGAACGTCACAACCAGATGAGGCTTTCATTTCCATGAATGCAGCATGACAATTATGTTTTTGTTAGCTTTTCCTTGTATCTCCCCAATCTGACAATTACTGTCTCATCATAAGGCATGAATCATTGTTCAGTGTGCGCACACGTATACCCACACATTTACTTATCCAAACCAGGATAAAACAGTTACTTCTGTTGTTCTTATAGGAACGcggaaaacattttatttgtcaaggTGCCGTAGAATGCACTGGTGGAGTATAT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075297 True 1040 lncRNA 0.45 3 9026383 9050515

Neighbor

gene id symbol gene type direction distance location
XLOC_037644 BX537313.1 coding downstream 2114 9009123 ~ 9024269 (-)
XLOC_037643 ing1 coding downstream 46915 8973080 ~ 8979468 (-)
XLOC_037642 rab20 coding downstream 131140 8887528 ~ 8895243 (-)
XLOC_037641 col4a1 coding downstream 356225 8634229 ~ 8670158 (-)
XLOC_037640 irs2b coding downstream 572323 8429239 ~ 8454060 (-)
XLOC_037646 cbsb coding upstream 130105 9180620 ~ 9228941 (-)
XLOC_037647 u2af1 coding upstream 179931 9230446 ~ 9242777 (-)
XLOC_037648 si:ch211-214p13.3 coding upstream 200951 9251466 ~ 9282519 (-)
XLOC_037649 NA coding upstream 235904 9286419 ~ 9289070 (-)
XLOC_037650 zgc:113337 coding upstream 271909 9322424 ~ 9348058 (-)
XLOC_037638 NA non-coding downstream 740175 8284155 ~ 8286208 (-)
XLOC_037637 NA non-coding downstream 862388 8160341 ~ 8163995 (-)
XLOC_037636 NA non-coding downstream 1083786 7941769 ~ 7942597 (-)
XLOC_037631 NA non-coding downstream 1520852 7499260 ~ 7505531 (-)
XLOC_037651 AL954142.4 non-coding upstream 304857 9355372 ~ 9370866 (-)
XLOC_037663 NA non-coding upstream 1317865 10368380 ~ 10370625 (-)
XLOC_037667 BX000444.1 non-coding upstream 1795403 10845918 ~ 10846549 (-)
XLOC_037671 NA non-coding upstream 2520797 11571312 ~ 11572354 (-)

Expression


Co-expression Network