G1842898


Basic Information

Item Value
gene id G1842898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 22391724 ~ 22392308 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2110029
ctgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgtgacatcagctgatgtaagaagggctttataaatacatttgattgattgatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcaccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagcacagtgaggttggatggagagcatttgtgaacagcagttttcagttccttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2110029 True 585 lncRNA 0.40 1 22391724 22392308

Neighbor

gene id symbol gene type direction distance location
LOC110502452 LOC106607058 coding downstream 569413 21678200 ~ 21822311 (-)
LOC118943877 LOC106607043 coding downstream 728435 21660458 ~ 21663289 (-)
LOC110502450 LOC106607022 coding downstream 787406 21560000 ~ 21604318 (-)
LOC110502449 LOC106607006 coding downstream 863069 21523734 ~ 21528655 (-)
LOC110502447 LOC106606998 coding downstream 874849 21512971 ~ 21516875 (-)
LOC110502455 LOC106607083 coding upstream 423949 22816257 ~ 22870825 (-)
LOC110503091 LOC106607091 coding upstream 487479 22879787 ~ 22950292 (-)
LOC110502457 LOC106605630 coding upstream 606931 22999239 ~ 23006480 (-)
LOC110502461 LOC106607165 coding upstream 821597 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 coding upstream 952045 23344353 ~ 23358461 (-)
G1842790 NA non-coding downstream 86780 22304710 ~ 22304944 (-)
G1842770 NA non-coding downstream 100460 22291059 ~ 22291264 (-)
G1842768 NA non-coding downstream 102699 22288770 ~ 22289025 (-)
G1842764 NA non-coding downstream 105920 22285548 ~ 22285804 (-)
G1842741 NA non-coding downstream 125739 22265748 ~ 22265985 (-)
G1842906 NA non-coding upstream 5123 22397431 ~ 22397682 (-)
G1843066 NA non-coding upstream 25398 22417706 ~ 22417975 (-)
G1843186 NA non-coding upstream 214353 22606661 ~ 22606876 (-)
G1843192 NA non-coding upstream 219019 22611327 ~ 22611528 (-)
G1843213 NA non-coding upstream 233341 22625649 ~ 22625851 (-)
G1841959 NA other downstream 1019925 21345514 ~ 21371799 (-)
G1841694 NA other downstream 1448109 20943307 ~ 20943615 (-)
LOC110502408 LOC106606370 other downstream 3006682 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 3270381 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 3537552 18849389 ~ 18854222 (-)
G1843946 NA other upstream 790679 23182987 ~ 23233423 (-)
G1846858 NA other upstream 3047499 25439807 ~ 25440387 (-)
G1850441 NA other upstream 5682617 28074925 ~ 28078251 (-)

Expression


Co-expression Network