Gene
RNA
| Item | Value |
|---|---|
| gene id | G1843722 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 22963548 ~ 22964556 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein RTF2 homolog isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2110903 | True | 1009 | lncRNA | 0.41 | 1 | 22963548 | 22964556 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503091 | LOC106607091 | coding | downstream | 13256 | 22879787 ~ 22950292 (-) |
| LOC110502455 | LOC106607083 | coding | downstream | 92723 | 22816257 ~ 22870825 (-) |
| LOC110502452 | LOC106607058 | coding | downstream | 1141237 | 21678200 ~ 21822311 (-) |
| LOC118943877 | LOC106607043 | coding | downstream | 1300259 | 21660458 ~ 21663289 (-) |
| LOC110502450 | LOC106607022 | coding | downstream | 1359230 | 21560000 ~ 21604318 (-) |
| LOC110502457 | LOC106605630 | coding | upstream | 34683 | 22999239 ~ 23006480 (-) |
| LOC110502461 | LOC106607165 | coding | upstream | 249349 | 23213905 ~ 23218749 (-) |
| LOC110502462 | LOC106607169 | coding | upstream | 379797 | 23344353 ~ 23358461 (-) |
| LOC100136042 | plek | coding | upstream | 411588 | 23376144 ~ 23384319 (-) |
| LOC110502466 | LOC106608700 | coding | upstream | 882500 | 23847056 ~ 23849143 (-) |
| G1843719 | NA | non-coding | downstream | 1396 | 22961882 ~ 22962152 (-) |
| G1843718 | NA | non-coding | downstream | 3102 | 22960150 ~ 22960446 (-) |
| G1843633 | NA | non-coding | downstream | 148928 | 22814410 ~ 22814620 (-) |
| G1843431 | NA | non-coding | downstream | 168299 | 22794929 ~ 22795249 (-) |
| G1843723 | NA | non-coding | upstream | 1116 | 22965672 ~ 22966113 (-) |
| G1843746 | NA | non-coding | upstream | 52684 | 23017240 ~ 23017453 (-) |
| G1843747 | NA | non-coding | upstream | 53452 | 23018008 ~ 23018487 (-) |
| G1843750 | NA | non-coding | upstream | 55798 | 23020354 ~ 23020562 (-) |
| G1843754 | NA | non-coding | upstream | 60568 | 23025124 ~ 23025361 (-) |
| G1841959 | NA | other | downstream | 1591749 | 21345514 ~ 21371799 (-) |
| G1841694 | NA | other | downstream | 2019933 | 20943307 ~ 20943615 (-) |
| LOC110502408 | LOC106606370 | other | downstream | 3578506 | 19261070 ~ 19385465 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | downstream | 3842205 | 19111958 ~ 19145332 (-) |
| LOC110502394 | LOC106606249 | other | downstream | 4109376 | 18849389 ~ 18854222 (-) |
| G1843946 | NA | other | upstream | 218431 | 23182987 ~ 23233423 (-) |
| G1846858 | NA | other | upstream | 2475251 | 25439807 ~ 25440387 (-) |
| G1850441 | NA | other | upstream | 5110369 | 28074925 ~ 28078251 (-) |
