G1843747


Basic Information

Item Value
gene id G1843747
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 23018008 ~ 23018487 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2110938
cacaagcccttgacgacaacataACCTCCTGTTCTCGAgaacgtgaggacgacggtcctatgtcagaatggttcagataataactacctaacgaagccaacatcagcgtgagctttgatTGCGAATGTTGTGAACTTTGagctcttattcactacagaagtgatacctcctagccgttgagttagcaacagcagatgcaaacgagggttaggaaggaacagacagagtatcccgtctaccacacaatgactttacgacaacgtatccaattgaccaccagagacattcttcaaaggactcggttgggcaacacagccttccatctaccaccaacctaccgaagcgcatctcagagtaaatatttattgcattttccttttccaaatgggcggtaatttagaatgcataatatactgtatttacgaaAGCACAACTTCACCCTTtattcctcagtcttcccgctctttcactcaaacccag

Function

NR:

description
uncharacterized protein LOC110518344

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2110938 True 480 lncRNA 0.44 1 23018008 23018487

Neighbor

gene id symbol gene type direction distance location
LOC110502457 LOC106605630 coding downstream 11528 22999239 ~ 23006480 (-)
LOC110503091 LOC106607091 coding downstream 67716 22879787 ~ 22950292 (-)
LOC110502455 LOC106607083 coding downstream 147183 22816257 ~ 22870825 (-)
LOC110502452 LOC106607058 coding downstream 1195697 21678200 ~ 21822311 (-)
LOC118943877 LOC106607043 coding downstream 1354719 21660458 ~ 21663289 (-)
LOC110502461 LOC106607165 coding upstream 195418 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 coding upstream 325866 23344353 ~ 23358461 (-)
LOC100136042 plek coding upstream 357657 23376144 ~ 23384319 (-)
LOC110502466 LOC106608700 coding upstream 828569 23847056 ~ 23849143 (-)
LOC110502467 LOC106607187 coding upstream 849152 23867639 ~ 24036992 (-)
G1843746 NA non-coding downstream 555 23017240 ~ 23017453 (-)
G1843723 NA non-coding downstream 51895 22965672 ~ 22966113 (-)
G1843722 NA non-coding downstream 53452 22963548 ~ 22964556 (-)
G1843719 NA non-coding downstream 55856 22961882 ~ 22962152 (-)
G1843718 NA non-coding downstream 57562 22960150 ~ 22960446 (-)
G1843750 NA non-coding upstream 1867 23020354 ~ 23020562 (-)
G1843754 NA non-coding upstream 6637 23025124 ~ 23025361 (-)
G1843756 NA non-coding upstream 8661 23027148 ~ 23027380 (-)
G1843757 NA non-coding upstream 9228 23027715 ~ 23027927 (-)
G1843808 NA non-coding upstream 80206 23098693 ~ 23099028 (-)
G1841959 NA other downstream 1646209 21345514 ~ 21371799 (-)
G1841694 NA other downstream 2074393 20943307 ~ 20943615 (-)
LOC110502408 LOC106606370 other downstream 3632966 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 3896665 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 4163836 18849389 ~ 18854222 (-)
G1843946 NA other upstream 164500 23182987 ~ 23233423 (-)
G1846858 NA other upstream 2421320 25439807 ~ 25440387 (-)
G1850441 NA other upstream 5056438 28074925 ~ 28078251 (-)

Expression


Co-expression Network