G1844044 (LOC106607169)


Basic Information

Item Value
gene id G1844044
gene name LOC106607169
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 23345044 ~ 23346489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2111249
tcttttttattattaaagcAATTTTATACACAGAAAGTCTGTGTTGAGGGCAGTCGATGGCATCCAATTGAACAAATGAGCTCTTGGGTTTGGGGGCAGCTTTGGTTTGGAAGGGTGCCAAACATCCATGAGGGCAGTAGCATGTCATCAATTTATAAAAATGTTAGAGGTTTTTTCACACATCAAGCCATGTTTACTCTACTTTGGGGGTTGAGATGACAAGGGGGCTTGTAGTTTTGATGTTCGTACTTCATGTTTTCAGACAGTAAATGTGTAAGGTTACGGCGTAGGTAGAAAACAACAATAGCAGCATTATGGAACCAGCTAACACTTGCTGAACGCAAAGCCAGAAAGCGTGAGCGAATAGAGGAGCAGTATCAGGAAGAACTGTCTCTTTAAGGTTGGTTTCATATAGGGTGGGAACAATGTCTTTAGAATGTGTCTTTAGCAGAGTCACATAATGGCTCAGTGTTTGTTCTTACTGGCATAAGTTGAGGCAAAACTTGTGAGATATTTTGGCAAAGGTCGACCTTATCTCAGACTCAGTTCTTCTTTTTGCTGGTCTTCTCGATCATGGTCTCCACCACCATGGCTGTCTCCTCATAGCCCTTGGTCTTGCGGTCATTGGAGAACTTTTCCACTGACTCCACCATCTCCACCTTCTCGTAGCTCATGGAGTCAGGGGGCATGCTGCTAGTGCCGCGGGGGCAGGGCATGGGACGAGGGCCCCTGCGGTGACTGTCGTCTTTACCCCCCTTGGGTCCGGAGGGATTGCTGGGGCCTTTGGGGGCAGGGTTGGGCTGTGGGGGGGGAGTAGGATTCTTCGGCCTAGGCTCGGGGTCTCCGCCCCTAGATTTCCCCTTTCCACCACCTTTTCCTCCCTTATCGTCTCCTTTCCCCCCCTCTCCGTCAGAGGGCTGGGTGGGGGTAAGGGGACCAGGGGGTGGCATGGGCTGAGGATGAGGGGGGTTGGGGGAGGGGGTGTAAGGCCCGAAGGGGTCATAAGGGGAGACCATGCCGTTGCGGATGGTGACGAAGACGTGTCCGGCGGAGGGGCTGGAGGTGTAGAAGTGAGGGTGGGGGTAGCTGCCATCGCCTGTCACCAGCACATAGCGCCCCTTGGTGTAAAAGTCTGCAATTGGCTCTGGCTTCTTGTACTTCCTCATTCGGTCTCTGACAATGTTACAAAGCGTGTCGAAGGCTTTGCTGATCTGAGCCCCGTCTGGCACATCCTGGGGCGTGTACAGGGACCTCTGCTCCTCCCTCTTCACCTCGCCTTCCTCCCCTGCCACCCCTCGCTTCTCGTCCTCCATGTGTTCAGCTCCACCGACTCTCTCCTCCTGGCCACTGTCCATCACATCTTTGGGGCTGATCTCCTTCTTCTTCAGGACCTTCTTGGCCAGGTTCTTCTGGCGAGGCTTGATACTGGTGATGTCCTGGATGGCT

Function

NR:

description
filensin-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2111249 True 1446 TUCP 0.53 1 23345044 23346489
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110502463 LOC106607177 coding upstream 907 23282091 ~ 23344137 (+)
LOC118943845 NA coding upstream 28694 23296397 ~ 23316350 (+)
LOC118943883 NA coding upstream 97399 23246034 ~ 23247645 (+)
LOC110502460 LOC106607150 coding upstream 137679 23153198 ~ 23207365 (+)
LOC110502459 LOC106607144 coding upstream 279301 23028909 ~ 23065743 (+)
LOC110502464 LOC106607182 coding downstream 107593 23454082 ~ 23732901 (+)
LOC110502469 LOC106607213 coding downstream 731419 24077908 ~ 24111417 (+)
LOC110502471 NA coding downstream 803546 24150035 ~ 24166011 (+)
LOC110502473 itprip coding downstream 820098 24166587 ~ 24170976 (+)
LOC110502474 LOC106607224 coding downstream 848225 24194714 ~ 24284046 (+)
G1844026 NA non-coding upstream 74905 23269906 ~ 23270139 (+)
G1844013 NA non-coding upstream 82468 23262364 ~ 23262576 (+)
G1843992 NA non-coding upstream 96418 23247835 ~ 23248626 (+)
G1843987 NA non-coding upstream 100223 23244612 ~ 23244821 (+)
G1844083 LOC106607169 non-coding downstream 3889 23350378 ~ 23350613 (+)
G1844084 NA non-coding downstream 4874 23351363 ~ 23351672 (+)
G1844086 NA non-coding downstream 9538 23356027 ~ 23356532 (+)
G1844103 NA non-coding downstream 22123 23368612 ~ 23368912 (+)
G1844811 NA non-coding downstream 470908 23817397 ~ 23817721 (+)
G1840558 fbxo28 other upstream 2559841 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 2828158 20358591 ~ 20516930 (+)
G1839872 NA other upstream 3280057 20062064 ~ 20064987 (+)
LOC110502420 slc18a2 other upstream 3305104 20037044 ~ 20058237 (+)
G1839383 NA other upstream 3822032 19522264 ~ 19523012 (+)
G1845108 NA other downstream 979775 24326264 ~ 24354246 (+)
G1849208 LOC106607606 other downstream 3927849 27274338 ~ 27276259 (+)
LOC110502527 LOC106607701 other downstream 4643785 27990245 ~ 27993189 (+)
LOC110502528 bic1a other downstream 4655386 28001291 ~ 28078254 (+)
LOC110502541 LOC106607837 other downstream 5151534 28497576 ~ 28571528 (+)

Expression

G1844044(LOC106607169) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G1844044(LOC106607169) Expression in each Bioproject

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G1844044(LOC106607169) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
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Co-expression Network