G1844086


Basic Information

Item Value
gene id G1844086
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 23356027 ~ 23356532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2111291
gctgTACACCTCTTAcctttctgtgtctgtctttggTGGAGTTGATGTCATCCTGAAGGAACTGAGTCTGGATCTGAAACTCCAGGTTCCTGAGCAGGTTATGGTCAGCCTCCTAGGAAAAGAGAAGAAAGGGGAAAAGGGTGAGTggcaaggagagaagaagagaaaaaaacgagagaagggaagagaagaagatggaagaaaaggagagaagaaagagaagtcAATAGGTCCATATATCGACTCCAATTCTCATAAAGCCTCAAACAGTATGACAATGCTGATATTGTTGACCTGAACACCACACAAAGCCTTTTTCTTCACTAGTACATTCCTCCATTAAATCCAAAGCCTCTAAGATCAATAGAAGCTATTTTAATTCGGTTCCATCACCACACTGTATTGTCCTGAACTCATAAGCTTTGTCTCTCAGACCACAAAGTCCTACCAGGGTTGCAGTTACACAATTGAATTATGATTCTGACACCCTGGACAAAGCTTGTAGA

Function

NR:

description
PREDICTED: filensin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2111291 True 506 lncRNA 0.42 1 23356027 23356532
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110502463 LOC106607177 coding upstream 11890 23282091 ~ 23344137 (+)
LOC118943845 NA coding upstream 39677 23296397 ~ 23316350 (+)
LOC118943883 NA coding upstream 108382 23246034 ~ 23247645 (+)
LOC110502460 LOC106607150 coding upstream 148662 23153198 ~ 23207365 (+)
LOC110502459 LOC106607144 coding upstream 290284 23028909 ~ 23065743 (+)
LOC110502464 LOC106607182 coding downstream 97550 23454082 ~ 23732901 (+)
LOC110502469 LOC106607213 coding downstream 721376 24077908 ~ 24111417 (+)
LOC110502471 NA coding downstream 793503 24150035 ~ 24166011 (+)
LOC110502473 itprip coding downstream 810055 24166587 ~ 24170976 (+)
LOC110502474 LOC106607224 coding downstream 838182 24194714 ~ 24284046 (+)
G1844084 NA non-coding upstream 4355 23351363 ~ 23351672 (+)
G1844083 LOC106607169 non-coding upstream 5414 23350378 ~ 23350613 (+)
G1844026 NA non-coding upstream 85888 23269906 ~ 23270139 (+)
G1844013 NA non-coding upstream 93451 23262364 ~ 23262576 (+)
G1844103 NA non-coding downstream 12080 23368612 ~ 23368912 (+)
G1844811 NA non-coding downstream 460865 23817397 ~ 23817721 (+)
G1844843 NA non-coding downstream 505148 23861680 ~ 23862113 (+)
G1844844 NA non-coding downstream 505910 23862442 ~ 23862746 (+)
G1844845 NA non-coding downstream 506746 23863278 ~ 23863521 (+)
G1844044 LOC106607169 other upstream 9538 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 2570824 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 2839141 20358591 ~ 20516930 (+)
G1839872 NA other upstream 3291040 20062064 ~ 20064987 (+)
LOC110502420 slc18a2 other upstream 3316087 20037044 ~ 20058237 (+)
G1845108 NA other downstream 969732 24326264 ~ 24354246 (+)
G1849208 LOC106607606 other downstream 3917806 27274338 ~ 27276259 (+)
LOC110502527 LOC106607701 other downstream 4633742 27990245 ~ 27993189 (+)
LOC110502528 bic1a other downstream 4645343 28001291 ~ 28078254 (+)
LOC110502541 LOC106607837 other downstream 5141491 28497576 ~ 28571528 (+)

Expression

G1844086 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 1.
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G1844086 Expression in each Bioproject

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G1844086 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
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Co-expression Network