Gene
RNA
| Item | Value |
|---|---|
| gene id | G1845445 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 24099004 ~ 24099329 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2112748 | True | 286 | lncRNA | 0.58 | 2 | 24099004 | 24099329 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110503092 | NA | coding | downstream | 26515 | 24058972 ~ 24072489 (-) |
| LOC110502467 | LOC106607187 | coding | downstream | 62012 | 23867639 ~ 24036992 (-) |
| LOC110502466 | LOC106608700 | coding | downstream | 249861 | 23847056 ~ 23849143 (-) |
| LOC100136042 | plek | coding | downstream | 714685 | 23376144 ~ 23384319 (-) |
| LOC110502462 | LOC106607169 | coding | downstream | 740543 | 23344353 ~ 23358461 (-) |
| LOC118943923 | NA | coding | upstream | 16486 | 24075852 ~ 24117680 (-) |
| gsto1 | gsto1 | coding | upstream | 74832 | 24174161 ~ 24183941 (-) |
| LOC110502475 | LOC106607228 | coding | upstream | 193570 | 24292899 ~ 24361215 (-) |
| LOC110502477 | LOC106608714 | coding | upstream | 421217 | 24520546 ~ 24630581 (-) |
| LOC110502481 | smndc1 | coding | upstream | 655236 | 24754565 ~ 24766770 (-) |
| G1845262 | NA | non-coding | downstream | 232141 | 23866275 ~ 23866863 (-) |
| G1845261 | NA | non-coding | downstream | 233682 | 23864703 ~ 23865322 (-) |
| G1845278 | NA | non-coding | downstream | 234990 | 23863665 ~ 23864014 (-) |
| G1845277 | NA | non-coding | downstream | 235541 | 23863071 ~ 23863463 (-) |
| G1845276 | NA | non-coding | downstream | 236332 | 23862314 ~ 23862672 (-) |
| G1845407 | NA | non-coding | upstream | 1463 | 24100792 ~ 24113117 (-) |
| G1845461 | NA | non-coding | upstream | 27615 | 24126944 ~ 24132598 (-) |
| G1845469 | NA | non-coding | upstream | 41471 | 24140800 ~ 24141026 (-) |
| G1845471 | NA | non-coding | upstream | 44124 | 24143453 ~ 24146931 (-) |
| G1845481 | NA | non-coding | upstream | 51940 | 24151269 ~ 24178167 (-) |
| G1843946 | NA | other | downstream | 865581 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 880734 | 23213905 ~ 23218749 (-) |
| G1841959 | NA | other | downstream | 2727205 | 21345514 ~ 21371799 (-) |
| G1841694 | NA | other | downstream | 3155389 | 20943307 ~ 20943615 (-) |
| G1846858 | NA | other | upstream | 1340478 | 25439807 ~ 25440387 (-) |
| G1850441 | NA | other | upstream | 3975596 | 28074925 ~ 28078251 (-) |
| LOC110502553 | NA | other | upstream | 4825410 | 28919846 ~ 28932600 (-) |
| LOC110502574 | LOC106608078 | other | upstream | 7052280 | 31151609 ~ 31239202 (-) |
| G1854905 | NA | other | upstream | 7118268 | 31217597 ~ 31218171 (-) |
