G1845988


Basic Information

Item Value
gene id G1845988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 24751032 ~ 24752844 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2113351
GTAGAGGTTTATTGATCAAGTTTTCAAGGGACCATTACCATGAACCACACAAAATAGTAGCAGGGGACCAGCAATATATTCTTTGTAAAAGTCACCTTTGATGGCTGCTTTAGCACAGGAGAGTGTTCAGAGACACTTTCTAAGTCCGAGTCTTTTTCAAAATGCATTTTACAAATGACCCAAAACTGACATTTAATAAATTCCTGGAACTAAGAAACCTGTGCAAGATTCAATTTAGCCATTTTAAGACACAGTTGGTGGTGATAATCGTTTTAGTTGTACCACGAAAATATGGGTATGGTCATAAGATGAAATGTCCAATTTGGTTAGTAGAATTGTCTTGCAGTGTGTGATTTTTGTAGACAAATACTCAAAATATACAGCTTCGTGGTTTTAACTTTGGAATGCTTCTCAACTACAATACAAAAAATAAGTTACTAAATAAGGATGCGAATCAAAACTCAAATTACATTCTGCCATGTGCTATATTGTTCATGCTACAAAGACATGAGCTCTCAAAACTGGTCAATCCAAAGCACATGACAATACAATTGAAAGCTACATTCAATACACATGCACCATTTACTTTTTTGTTCCAACTTTTACAGCCATTTTATCTTACTATTGATTACTATTTGTAATTAATACATCTATTGAAGTTGCATACAAAACAAGCAAGTGGTGTTGGACGGACAAAATTAACAGCCAACTTAAGAGTTGACATAACTGTCAATGAGTGTTATTGCTTCCGAATTGTGCTTGGGAAGTGCGGGATAGCTTATTATAGCTGCCTACCGTATACAAACAATATTACTTTTGAAATCTCAAGGGGGATTGATGTCAATCATCTCACAAAAGAGGCCACTGAGTGATACGTTTAGCCTGTCCTGTACCATTGCACCTAGCTTTTGTCTGGGATAACTTGTCAAACAATGCTCAGTTCAAAACCACAACAGACTTAACTTTACATTTGTCAAAACATCTAAATAATTCAAGTGTGACcaagacatacagtacaacacaataAATATTGGAAAAATAAATACTACATTAAGGTCTGTTTAAGACTGCAGGTGGAGTAGCCCTCGTCGCTGGCCAGGCTCTGCCGACTGCTGTGGTCATCCAAGTCACTGCAGCCACTGGTGCTGATACTGTCCAACTCTCCATGGGAGAACTCAGTGCTTTCCACGTCCACCTCGATCTCTT

Function

NR:

description
max-interacting protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2113351 True 1206 lncRNA 0.38 2 24751032 24752844

Neighbor

gene id symbol gene type direction distance location
LOC110502477 LOC106608714 coding downstream 120451 24520546 ~ 24630581 (-)
LOC110502475 LOC106607228 coding downstream 389817 24292899 ~ 24361215 (-)
gsto1 gsto1 coding downstream 567091 24174161 ~ 24183941 (-)
LOC118943923 NA coding downstream 633352 24075852 ~ 24117680 (-)
LOC110503092 NA coding downstream 678543 24058972 ~ 24072489 (-)
LOC110502481 smndc1 coding upstream 1721 24754565 ~ 24766770 (-)
LOC110502483 LOC106607298 coding upstream 54129 24806973 ~ 24813358 (-)
LOC118943844 NA coding upstream 87065 24839909 ~ 24846204 (-)
gnrh1 gnrh1 coding upstream 374767 25127611 ~ 25128951 (-)
LOC110502487 LOC106607391 coding upstream 378412 25131256 ~ 25192325 (-)
G1845784 NA non-coding downstream 128339 24614539 ~ 24622693 (-)
G1845627 NA non-coding downstream 347140 24394066 ~ 24403892 (-)
G1845501 NA non-coding downstream 555780 24194755 ~ 24195252 (-)
G1845481 NA non-coding downstream 572865 24151269 ~ 24178167 (-)
G1846027 NA non-coding upstream 66458 24819302 ~ 24820076 (-)
G1846045 NA non-coding upstream 83754 24836598 ~ 24837797 (-)
G1846126 LOC106577027 non-coding upstream 132886 24885730 ~ 24889515 (-)
G1846180 NA non-coding upstream 195736 24948580 ~ 24948779 (-)
G1846283 NA non-coding upstream 270455 25023299 ~ 25023511 (-)
LOC110502462 LOC106607169 other downstream 1405261 23344353 ~ 23358461 (-)
G1843946 NA other downstream 1517609 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other downstream 1532762 23213905 ~ 23218749 (-)
G1841959 NA other downstream 3379233 21345514 ~ 21371799 (-)
G1841694 NA other downstream 3807417 20943307 ~ 20943615 (-)
G1846858 NA other upstream 686963 25439807 ~ 25440387 (-)
G1850441 NA other upstream 3322081 28074925 ~ 28078251 (-)
LOC110502553 NA other upstream 4171895 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 6398765 31151609 ~ 31239202 (-)
G1854905 NA other upstream 6464753 31217597 ~ 31218171 (-)

Expression


Co-expression Network