XLOC_037657 (fstl1b)


Basic Information

Item Value
gene id XLOC_037657
gene name fstl1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 9735493 ~ 9842149 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073934
CTGAGCGCTGCTCGAGTTTCCTGCGATCACATCCTCAGACCTACAGCGGACCGAGACGTCGCGCTTTTCCTCCTCACAGACACCCAGGCGGcgtttttttgcaaaaaatgATGTTTCGGTGTTTACCCGTGTTTTTCCTCCTGGCTGTAGTCTGCTGTCATGCCGAGCAGGAGGCTCAAAGCAAATCAAAGGTGTGTGCTAATGTGTTCTGTGGTGCTGGACGAGAGTGTGCCGTGAATGAGAAAGGAGAACCCAGCTGTCTGTGCATTGAGCAATGCAAGACTCATAAGCGCTCGGTGTGTGGCAGTAATGGAAAGACATACCGGAACCACTGCGAACTGCATCGTGATGCCTGTCTCACTGGACTGAAGATCCAAGTGGCTCATGATGGACACTGCAAAGaGAAGAAGAAGGAGAAGGCTGCGGCCAGTCCAGtcGTGTGTTATGTTGCTGATCGTAACGAGCTGCGCAGACGTGTGATCGAGTGGCTGCAGACGGAGGTTGTTCCTGATGGCTGGTTCACCAAGGGCTCCAACTTCACTGATATCCTCCTCAAGTACTTTAAGAATTATGATAATGGAGACTCTCAGCTGGATTCTGCAGAGCTGCTCAAGTTCATCCAGCACAACGAGACAGCCGTTCAGATGAGCTCCTATGCCGAAGAGGAAAACAACCGCCTTCTCAGgAGTCTGTGTGTGGACGCTCTTATTGAGCTCTCAGATGAGAACGCAGACTGGAAACTGAGCTTTGACGAATTCCTCAACTGCCTGAAACCAGGCTTCAGCCCTCCTGAGAAAAAGTGTGCTCTAGAAGATGAGACATATGAGGATGGTGCAGAGACGCAGGTGGAGTGCAATCGCTGCGTCTGCGCTTGTGGAAACTGGGTCTGCACCGCCATGACTTGTGATGAGAAAACCCCGGTTTTTGACACTGAAGGGGATCAGGAGATGACTGAAGAGGAGTGGACCCGCCGTGTGGCTGAACTCAACAAACATCAGGAAACTGTGGAGAAGATGAAGACCAGCACAAAGGAAGTCTAAACCAGGACCGAGACGAGAGGAGGGACAAAATGTGGAAGATTTCCTCTCCTACTGATCAGGATTCCTGAGATTATGTACTGTTTTTGGAAGAATCACAGCATTTTGTTTGAATAGGTTATTACTTTTAATGCTATCAGTACTGCATCTATTAATgtgttatgtatttttttgtttttctttatattttattagcTTTTCAATATGGGTTCAAGTGCTGTAAATTGTTTGATTGTGTCACTCAAAACGTTGCCGAAGAGGCCTCAGCACTTTGTTACAGAGGCCATCGTTTTActattttttgattttttgtatTACTCTTTAtaccatttatttgtttgtctatcTGCAGTTATATgtggaaatatgttttttttttttttttttttttgagacaatGGCAATAGAAGATGAATAGGAAAATGAATAGGACAGGTTCGAGAGTGATTCTGAGAGAGCCGAACACCACGGGTTCATCCATCACAAAAGCTTCAGGCAGACTGgtaaatgctaatgctaatgcaTCTACACACTAGCGAAAGCTAAAAATGTGACTTGAACGAAGCTCAGCCATGGTGGCTCTCTATTTCACTCTCGTCATGAAGGCAGTCATAGTCTTGAGACCTTTCGTAAAGGTGCTAATGTTAGTATTCATCTGTTTGCTGCTTTGCTCTCTTGCTCTAGATGGTGGAAAATGCTCACTAGAAGCTAAAAAGAGTGGATCCAACCCTGTTTTCTTCTGGTATTAACACATGCTTTCAGTATTCCAGTGGTCAGATTAGATGCATCACCACAGTATTAAAATCTGCATGagctggaagttgctgagacttttacaGAGtacatacaggaatcagagagcgAAATTCAATACCTctcaagacctttttaagaccttttaaccACTTATCAACCTGAAACACTGGCAAAactttaacttacagtatatttaccaaatattaatgtaaaaaactaatccaaaactaagaCATCATTCATATACttaaaaaaatccattaaatctagctaattcagcaggttggcacagaactgcagaaataatggtgttgctgcaataaacaaagcagcatgatgtcaaatctagcaagattttattgatttcataaactacacagcatcctgattaAATGTAATACCTTGCAatatagcatttaagactttttaatactttttaagggcctttaATTTCTTTACATTGATTTGTcatcttttaatacttttttaggaCCCcgcagacttttatttcagtatgttgatgtacttccaactgtaTGAAACTGTATGAAACTTGCGCTTTATCCCCTCACAGCAAATTAATGGTTAGGGAGGCGTGGTTAGGAATATTACTTTGTTTCTATATAAGTCATCAAAGTGATGTCAACAGAAGGACCGCCATTCCAAATTTAGAAGGAAATTGTTAGATTTGACTAAAGATTAccaaaattaaccttttttcagTGAATTAATTTGCACAGATGAATTTTTCACCTGAAGAATAACAAcatgagctagcaaaataaactattgagtaaattttgatttcatgtggcctaaaatattcattcaaataCATGTCTTTTGGCCAATTGTGTTGTGTTGCCAATTCCATCACATCACTTTTAGTATGAGCAAGCAGGAAAGCAAATATATGAAAAAACTATGGATGGCAACAACATTTTCAAACATAATCTGTGTTTTAATACAACACAGCTATTTATGAGTTAACATCTTGTTATACTGCAATTCAGTTTTTTTGCAGAAGGTGGTCTTTTGAGGCTACTTGAAATGCATTGAACTAGCCACAAAATTAGTTTACACTACAAAAACAATCTCATTGAATGCATTTTCGCCAACCTCTAGATCTATGCAAAAGTGCATTCAAACTTGCATTTAGTTTCATAAACTTTTGATAAGTTTGACGAAAATGgatcttaaagggttagttcacccaaaaaggaaaattctgttattaattactgacCTTCTCGTCGTTCCAATCctctgagaccttcgttcatcttgggaacacaaattaagatattttagacattcaaagtccagaaaagaaaacaaaaacattgtcaaaaaatgtcatgtgacttcagtagtttaactgtaatcatacgaagctccaggGTTCTGAGCTCAGGTAGACACCCTAATACGTTATTCGTCTTATCAGGATAGAGAGAGATAGGGTCCGAGCACAGTATCTAGCCCTGCTCCACAACCAACTCCCTCCCTATAGGGTGGAGGGATATCAAATTCAAGAGAAAACGAAGGTATGGCATGTTTGACTATTTATAAGGGTTTAgtcttgagctgattggataatagaatgattgtctgtgatgaattagcctcgtcAAAGACTGATAGTGCTCCtccaaatttgtttataaatcatCACTAAATGTGTGCCCTAATTTTACCTAGAAGAACAAAAATGCACTTTTTGTGCGCAaaaatgttcttggagcttcatattaTTAGTTAAGTCACATGGATTGTTTTAACTATATCCTTttagttccttttctggactttaaacatCCTGGAATTCTTGCTGTCTATAGAGGATGAGAAAACTCTCAGACTtcttctaaaatatattatttgtgcttcGAAGATGACCAAATGTCTTCGGGGTTTAGAACGACATGAGTGTTGAGTATTTTCAACAGAATCTCCATTTTTGGCTGAACAAACCCTTTCATACCAGGTGAAAACAGGATATCTGTGAAAAAAACAGGCAATACCTTTACATTTTAATATCACATGGCAACAAACCGACCGTGTTATTACTTGACGAACATGCTTTTTTAGCCCTGAGCAATTTCACCAAAAACCCTTTGATTAGAATAGATTAGACCTTCGTAGATTAGACAAATAGTGCGGCACAAATGCATTAGCTTAGCTTGAGCTTGTATGTATGTTAGTTGCTAGAGACTCTGTGCTAAAGCTCTCACACTGCGCTCAGTCCTACTCTGATGCTGGGTTTGaatctataaatatatacaaacaaacCAGAATTAGAAGAAATGAAACTATTCGAGATGGGACTGAGAACAGACGGAGTGATCTAAAACCAAAGCCTGATGTTTAGGATGTTGAAATTGTTGTACGAAAACCTCCAGGTATACCACTACTCTGGACCCAGCAACTACTTTATACCTGTTACGTAAAATATCTGTCAGATTAAGGATTAGAGTCGCTATTGCCTCTGTAGTGTAGTTGCATCCTTACAGAATTGAGAGATTTTGCGTACGTGTGCAAAAtgcatgagtgtgagtgtgttcgCTTGTTTAATTTCCACTAAATTCCACTAACAGTACGAATCCTTTGTGGTAATGAGTGCCTTATATACAAACAGTGTGCCATGGGTGAAGTGGCCTCTTCTGTAGGTATAAACCAACTAATATAGGACACAGTGCACATGAATTTTCCAGTATTATGGTAGACACCTAGCAAATGCCTTTTTTATTATGTCTATATGATTGTCTTATACAGTGGGGcagaattaaaacattttatggttaaaaaaaacatctcttgttttgtttcattCGTTATTACCTTACTAtgattgtatttttatatgtacGGTGTtctaattttaataatgtaacacGAATAAAAGGTACAACCATTTA
>TCONS_00073935
ATTGATGGAAAACAATGAACCCTTTTGCTAATCGCGCAGAGGCAGGGAATTTTACACAATGGACTATGGAAACAGTTTCCTGTgGAGGCTCAAAGCAAATCAAAGGTGTGTGCTAATGTGTTCTGTGGTGCTGGACGAGAGTGTGCCGTGAATGAGAAAGGAGAACCCAGCTGTCTGTGCATTGAGCAATGCAAGACTCATAAGCGCTCGGTGTGTGGCAGTAATGGAAAGACATACCGGAACCACTGCGAACTGCATCGTGATGCCTGTCTCACTGGACTGAAGATCCAAGTGGCTCATGATGGACACTGCAAAGaGAAGAAGAAGGAGAAGGCTGCGGCCAGTCCAGtcGTGTGTTATGTTGCTGATCGTAACGAGCTGCGCAGACGTGTGATCGAGTGGCTGCAGACGGAGGTTGTTCCTGATGGCTGGTTCACCAAGGGCTCCAACTTCACTGATATCCTCCTCAAGTACTTTAAGAATTATGATAATGGAGACTCTCAGCTGGATTCTGCAGAGCTGCTCAAGTTCATCCAGCACAACGAGACAGCCGTTCAGATGAGCTCCTATGCCGAAGAGGAAAACAACCGCCTTCTCAGgAGTCTGTGTGTGGACGCTCTTATTGAGCTCTCAGATGAGAACGCAGACTGGAAACTGAGCTTTGACGAATTCCTCAACTGCCTGAAACCAGGCTTCAGCCCTCCTGAGAAAAAGTGTGCTCTAGAAGATGAGACATATGAGGATGGTGCAGAGAC
>TCONS_00073936
ATTGATGGAAAACAATGAACCCTTTTGCTAATCGCGCAGAGGCAGGGAATTTTACACAATGGACTATGGAAACAGTTTCCTGTgCAGGAGGCTCAAAGCAAATCAAAGGTGTGTGCTAATGTGTTCTGTGGTGCTGGACGAGAGTGTGCCGTGAATGAGAAAGGAGAACCCAGCTGTCTGTGCATTGAGCAATGCAAGACTCATAAGCGCTCGGTGTGTGGCAGTAATGGAAAGACATACCGGAACCACTGCGAACTGCATCGTGATGCCTGTCTCACTGGACTGAAGATCCAAGTGGCTCATGATGGACACTGCAAAGGATGATGGGTCCTATGCAATCTGCTTTCAACCACAGGAAGTGTGATGCAGGAGGACCTCAGCAGCCAATACGCTTGCTTCTCAACATTTACTGAACCACATCTCAGTGTTCCAATCTGCAGCACATTTACGGATACTCTTCTCCACCACAGCTCCAACTGTGTATTCAGTTTCAGTCTTCGCAGTTGCAATATTATAGTTAAATAAAATCGGCTATCAAAGTGGTCACTAGATAATGGCTTAAACTATATTGTAATGGTGCCATAGAATAAAAATCAGGATATACAGTACATAGGCAAAGCTGAGTGATAAGAGTACAGTACCTTGATTGAAATGACCATTGTTCCACTCCTTGTGAAAAACGGGCCAAAACACAGACTATTAATTTGCacacaaaattaataatatgCATGCCAGAGGCtgcatttgattggccacaacatttcctatattttttcccCTGATTTTTAGGTTTATCTTAGCTTGTATGATGTtatatgtgggactcttattttgaaaacaggacCAGCAGGACATGAACTCTGGGTATCATTAGGTAGTGGGCAGTTATAACGTCTAATTAACTGTATCTTTAgttagtttaaaatgtatatcGGGAAACTTGCTAAGTACTTTTTAATGAGGCAACAGACACATTTACATTTGTAATGGAACACTGCTGAATTAGTGCTTAATGCAAGTTTTAATCTTGTTATGTCTCTCAGATTCTAAATAAGCatctaaaactattttttttatatcagagaacaatttaatcAATGTACTCTATGGCACATTTAAATATCCTTTTTTAGATCAGAAATGACagattctaaaataaaaacatt

Function

symbol description
fstl1b Predicted to enable calcium ion binding activity. Acts upstream of or within dorsal/ventral pattern formation; notochord cell differentiation; and regulation of BMP signaling pathway. Predicted to be located in extracellular region. Is expressed in several structures, including axis; central nervous system; fin; head mesenchyme; and mesoderm. Orthologous to human FSTL1 (follistatin like 1).

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0030510 regulation of BMP signaling pathway biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0060034 notochord cell differentiation biological_process
GO:0030903 notochord development biological_process
GO:0005509 calcium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3029 Predicted to enable calcium ion binding activity. Acts upstream of or within dorsal/ventral pattern formation; notochord cell differentiation; and regulation of BMP signaling pathway. Predicted to be located in extracellular region. Is expressed in several structures, including axis; central nervous system; fin; head mesenchyme; and mesoderm. Orthologous to human FSTL1 (follistatin like 1).

Ensembl:

ensembl_id ENSDARG00000039576

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073934 False 4711 mRNA 0.39 11 9735493 9842149
TCONS_00073935 False 755 processed_transcript 0.49 8 9743559 9805319
TCONS_00073936 True 1166 processed_transcript 0.39 4 9770335 9805319

Neighbor

gene id symbol gene type direction distance location
XLOC_037656 lrrc58b coding downstream 3281 9719225 ~ 9732212 (-)
XLOC_037655 gpr156 coding downstream 29981 9675926 ~ 9705512 (-)
XLOC_037654 gsk3ba coding downstream 64249 9577743 ~ 9671244 (-)
XLOC_037653 si:ch211-214p13.9 coding downstream 315789 9415660 ~ 9419704 (-)
XLOC_037652 si:ch211-214p13.9 coding downstream 320493 9411009 ~ 9415000 (-)
XLOC_037658 prmt2 coding upstream 110914 9953063 ~ 9960940 (-)
XLOC_037659 ugt1a1 coding upstream 127838 9969987 ~ 10003782 (-)
XLOC_037660 spopla coding upstream 208741 10050890 ~ 10068105 (-)
XLOC_037661 hnmt coding upstream 296047 10138196 ~ 10145880 (-)
XLOC_037662 thsd7ba coding upstream 310671 10152820 ~ 10532591 (-)
XLOC_037651 AL954142.4 non-coding downstream 364627 9355372 ~ 9370866 (-)
XLOC_037649 NA non-coding downstream 446423 9286419 ~ 9289070 (-)
XLOC_037645 NA non-coding downstream 684978 9026383 ~ 9050515 (-)
XLOC_037644 BX537313.1 non-coding downstream 711224 9009123 ~ 9024269 (-)
XLOC_037638 NA non-coding downstream 1449285 8284155 ~ 8286208 (-)
XLOC_037663 NA non-coding upstream 526231 10368380 ~ 10370625 (-)
XLOC_037667 BX000444.1 non-coding upstream 1003769 10845918 ~ 10846549 (-)
XLOC_037671 NA non-coding upstream 1729163 11571312 ~ 11572354 (-)
XLOC_037673 NA non-coding upstream 1753838 11595987 ~ 11655031 (-)
XLOC_037675 NA non-coding upstream 1980230 11822379 ~ 11855305 (-)

Expression


Co-expression Network