XLOC_037657 (fstl1b)


Basic Information

Item Value
gene id XLOC_037657
gene name fstl1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 9735493 ~ 9842149 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073934
CTGAGCGCTGCTCGAGTTTCCTGCGATCACATCCTCAGACCTACAGCGGACCGAGACGTCGCGCTTTTCCTCCTCACAGACACCCAGGCGGcgtttttttgcaaaaaatgATGTTTCGGTGTTTACCCGTGTTTTTCCTCCTGGCTGTAGTCTGCTGTCATGCCGAGCAGGAGGCTCAAAGCAAATCAAAGGTGTGTGCTAATGTGTTCTGTGGTGCTGGACGAGAGTGTGCCGTGAATGAGAAAGGAGAACCCAGCTGTCTGTGCATTGAGCAATGCAAGACTCATAAGCGCTCGGTGTGTGGCAGTAATGGAAAGACATACCGGAACCACTGCGAACTGCATCGTGATGCCTGTCTCACTGGACTGAAGATCCAAGTGGCTCATGATGGACACTGCAAAGaGAAGAAGAAGGAGAAGGCTGCGGCCAGTCCAGtcGTGTGTTATGTTGCTGATCGTAACGAGCTGCGCAGACGTGTGATCGAGTGGCTGCAGACGGAGGTTGTTCCTGATGGCTGGTTCACCAAGGGCTCCAACTTCACTGATATCCTCCTCAAGTACTTTAAGAATTATGATAATGGAGACTCTCAGCTGGATTCTGCAGAGCTGCTCAAGTTCATCCAGCACAACGAGACAGCCGTTCAGATGAGCTCCTATGCCGAAGAGGAAAACAACCGCCTTCTCAGgAGTCTGTGTGTGGACGCTCTTATTGAGCTCTCAGATGAGAACGCAGACTGGAAACTGAGCTTTGACGAATTCCTCAACTGCCTGAAACCAGGCTTCAGCCCTCCTGAGAAAAAGTGTGCTCTAGAAGATGAGACATATGAGGATGGTGCAGAGACGCAGGTGGAGTGCAATCGCTGCGTCTGCGCTTGTGGAAACTGGGTCTGCACCGCCATGACTTGTGATGAGAAAACCCCGGTTTTTGACACTGAAGGGGATCAGGAGATGACTGAAGAGGAGTGGACCCGCCGTGTGGCTGAACTCAACAAACATCAGGAAACTGTGGAGAAGATGAAGACCAGCACAAAGGAAGTCTAAACCAGGACCGAGACGAGAGGAGGGACAAAATGTGGAAGATTTCCTCTCCTACTGATCAGGATTCCTGAGATTATGTACTGTTTTTGGAAGAATCACAGCATTTTGTTTGAATAGGTTATTACTTTTAATGCTATCAGTACTGCATCTATTAATgtgttatgtatttttttgtttttctttatattttattagcTTTTCAATATGGGTTCAAGTGCTGTAAATTGTTTGATTGTGTCACTCAAAACGTTGCCGAAGAGGCCTCAGCACTTTGTTACAGAGGCCATCGTTTTActattttttgattttttgtatTACTCTTTAtaccatttatttgtttgtctatcTGCAGTTATATgtggaaatatgttttttttttttttttttttttgagacaatGGCAATAGAAGATGAATAGGAAAATGAATAGGACAGGTTCGAGAGTGATTCTGAGAGAGCCGAACACCACGGGTTCATCCATCACAAAAGCTTCAGGCAGACTGgtaaatgctaatgctaatgcaTCTACACACTAGCGAAAGCTAAAAATGTGACTTGAACGAAGCTCAGCCATGGTGGCTCTCTATTTCACTCTCGTCATGAAGGCAGTCATAGTCTTGAGACCTTTCGTAAAGGTGCTAATGTTAGTATTCATCTGTTTGCTGCTTTGCTCTCTTGCTCTAGATGGTGGAAAATGCTCACTAGAAGCTAAAAAGAGTGGATCCAACCCTGTTTTCTTCTGGTATTAACACATGCTTTCAGTATTCCAGTGGTCAGATTAGATGCATCACCACAGTATTAAAATCTGCATGagctggaagttgctgagacttttacaGAGtacatacaggaatcagagagcgAAATTCAATACCTctcaagacctttttaagaccttttaaccACTTATCAACCTGAAACACTGGCAAAactttaacttacagtatatttaccaaatattaatgtaaaaaactaatccaaaactaagaCATCATTCATATACttaaaaaaatccattaaatctagctaattcagcaggttggcacagaactgcagaaataatggtgttgctgcaataaacaaagcagcatgatgtcaaatctagcaagattttattgatttcataaactacacagcatcctgattaAATGTAATACCTTGCAatatagcatttaagactttttaatactttttaagggcctttaATTTCTTTACATTGATTTGTcatcttttaatacttttttaggaCCCcgcagacttttatttcagtatgttgatgtacttccaactgtaTGAAACTGTATGAAACTTGCGCTTTATCCCCTCACAGCAAATTAATGGTTAGGGAGGCGTGGTTAGGAATATTACTTTGTTTCTATATAAGTCATCAAAGTGATGTCAACAGAAGGACCGCCATTCCAAATTTAGAAGGAAATTGTTAGATTTGACTAAAGATTAccaaaattaaccttttttcagTGAATTAATTTGCACAGATGAATTTTTCACCTGAAGAATAACAAcatgagctagcaaaataaactattgagtaaattttgatttcatgtggcctaaaatattcattcaaataCATGTCTTTTGGCCAATTGTGTTGTGTTGCCAATTCCATCACATCACTTTTAGTATGAGCAAGCAGGAAAGCAAATATATGAAAAAACTATGGATGGCAACAACATTTTCAAACATAATCTGTGTTTTAATACAACACAGCTATTTATGAGTTAACATCTTGTTATACTGCAATTCAGTTTTTTTGCAGAAGGTGGTCTTTTGAGGCTACTTGAAATGCATTGAACTAGCCACAAAATTAGTTTACACTACAAAAACAATCTCATTGAATGCATTTTCGCCAACCTCTAGATCTATGCAAAAGTGCATTCAAACTTGCATTTAGTTTCATAAACTTTTGATAAGTTTGACGAAAATGgatcttaaagggttagttcacccaaaaaggaaaattctgttattaattactgacCTTCTCGTCGTTCCAATCctctgagaccttcgttcatcttgggaacacaaattaagatattttagacattcaaagtccagaaaagaaaacaaaaacattgtcaaaaaatgtcatgtgacttcagtagtttaactgtaatcatacgaagctccaggGTTCTGAGCTCAGGTAGACACCCTAATACGTTATTCGTCTTATCAGGATAGAGAGAGATAGGGTCCGAGCACAGTATCTAGCCCTGCTCCACAACCAACTCCCTCCCTATAGGGTGGAGGGATATCAAATTCAAGAGAAAACGAAGGTATGGCATGTTTGACTATTTATAAGGGTTTAgtcttgagctgattggataatagaatgattgtctgtgatgaattagcctcgtcAAAGACTGATAGTGCTCCtccaaatttgtttataaatcatCACTAAATGTGTGCCCTAATTTTACCTAGAAGAACAAAAATGCACTTTTTGTGCGCAaaaatgttcttggagcttcatattaTTAGTTAAGTCACATGGATTGTTTTAACTATATCCTTttagttccttttctggactttaaacatCCTGGAATTCTTGCTGTCTATAGAGGATGAGAAAACTCTCAGACTtcttctaaaatatattatttgtgcttcGAAGATGACCAAATGTCTTCGGGGTTTAGAACGACATGAGTGTTGAGTATTTTCAACAGAATCTCCATTTTTGGCTGAACAAACCCTTTCATACCAGGTGAAAACAGGATATCTGTGAAAAAAACAGGCAATACCTTTACATTTTAATATCACATGGCAACAAACCGACCGTGTTATTACTTGACGAACATGCTTTTTTAGCCCTGAGCAATTTCACCAAAAACCCTTTGATTAGAATAGATTAGACCTTCGTAGATTAGACAAATAGTGCGGCACAAATGCATTAGCTTAGCTTGAGCTTGTATGTATGTTAGTTGCTAGAGACTCTGTGCTAAAGCTCTCACACTGCGCTCAGTCCTACTCTGATGCTGGGTTTGaatctataaatatatacaaacaaacCAGAATTAGAAGAAATGAAACTATTCGAGATGGGACTGAGAACAGACGGAGTGATCTAAAACCAAAGCCTGATGTTTAGGATGTTGAAATTGTTGTACGAAAACCTCCAGGTATACCACTACTCTGGACCCAGCAACTACTTTATACCTGTTACGTAAAATATCTGTCAGATTAAGGATTAGAGTCGCTATTGCCTCTGTAGTGTAGTTGCATCCTTACAGAATTGAGAGATTTTGCGTACGTGTGCAAAAtgcatgagtgtgagtgtgttcgCTTGTTTAATTTCCACTAAATTCCACTAACAGTACGAATCCTTTGTGGTAATGAGTGCCTTATATACAAACAGTGTGCCATGGGTGAAGTGGCCTCTTCTGTAGGTATAAACCAACTAATATAGGACACAGTGCACATGAATTTTCCAGTATTATGGTAGACACCTAGCAAATGCCTTTTTTATTATGTCTATATGATTGTCTTATACAGTGGGGcagaattaaaacattttatggttaaaaaaaacatctcttgttttgtttcattCGTTATTACCTTACTAtgattgtatttttatatgtacGGTGTtctaattttaataatgtaacacGAATAAAAGGTACAACCATTTA
>TCONS_00073935
ATTGATGGAAAACAATGAACCCTTTTGCTAATCGCGCAGAGGCAGGGAATTTTACACAATGGACTATGGAAACAGTTTCCTGTgGAGGCTCAAAGCAAATCAAAGGTGTGTGCTAATGTGTTCTGTGGTGCTGGACGAGAGTGTGCCGTGAATGAGAAAGGAGAACCCAGCTGTCTGTGCATTGAGCAATGCAAGACTCATAAGCGCTCGGTGTGTGGCAGTAATGGAAAGACATACCGGAACCACTGCGAACTGCATCGTGATGCCTGTCTCACTGGACTGAAGATCCAAGTGGCTCATGATGGACACTGCAAAGaGAAGAAGAAGGAGAAGGCTGCGGCCAGTCCAGtcGTGTGTTATGTTGCTGATCGTAACGAGCTGCGCAGACGTGTGATCGAGTGGCTGCAGACGGAGGTTGTTCCTGATGGCTGGTTCACCAAGGGCTCCAACTTCACTGATATCCTCCTCAAGTACTTTAAGAATTATGATAATGGAGACTCTCAGCTGGATTCTGCAGAGCTGCTCAAGTTCATCCAGCACAACGAGACAGCCGTTCAGATGAGCTCCTATGCCGAAGAGGAAAACAACCGCCTTCTCAGgAGTCTGTGTGTGGACGCTCTTATTGAGCTCTCAGATGAGAACGCAGACTGGAAACTGAGCTTTGACGAATTCCTCAACTGCCTGAAACCAGGCTTCAGCCCTCCTGAGAAAAAGTGTGCTCTAGAAGATGAGACATATGAGGATGGTGCAGAGAC
>TCONS_00073936
ATTGATGGAAAACAATGAACCCTTTTGCTAATCGCGCAGAGGCAGGGAATTTTACACAATGGACTATGGAAACAGTTTCCTGTgCAGGAGGCTCAAAGCAAATCAAAGGTGTGTGCTAATGTGTTCTGTGGTGCTGGACGAGAGTGTGCCGTGAATGAGAAAGGAGAACCCAGCTGTCTGTGCATTGAGCAATGCAAGACTCATAAGCGCTCGGTGTGTGGCAGTAATGGAAAGACATACCGGAACCACTGCGAACTGCATCGTGATGCCTGTCTCACTGGACTGAAGATCCAAGTGGCTCATGATGGACACTGCAAAGGATGATGGGTCCTATGCAATCTGCTTTCAACCACAGGAAGTGTGATGCAGGAGGACCTCAGCAGCCAATACGCTTGCTTCTCAACATTTACTGAACCACATCTCAGTGTTCCAATCTGCAGCACATTTACGGATACTCTTCTCCACCACAGCTCCAACTGTGTATTCAGTTTCAGTCTTCGCAGTTGCAATATTATAGTTAAATAAAATCGGCTATCAAAGTGGTCACTAGATAATGGCTTAAACTATATTGTAATGGTGCCATAGAATAAAAATCAGGATATACAGTACATAGGCAAAGCTGAGTGATAAGAGTACAGTACCTTGATTGAAATGACCATTGTTCCACTCCTTGTGAAAAACGGGCCAAAACACAGACTATTAATTTGCacacaaaattaataatatgCATGCCAGAGGCtgcatttgattggccacaacatttcctatattttttcccCTGATTTTTAGGTTTATCTTAGCTTGTATGATGTtatatgtgggactcttattttgaaaacaggacCAGCAGGACATGAACTCTGGGTATCATTAGGTAGTGGGCAGTTATAACGTCTAATTAACTGTATCTTTAgttagtttaaaatgtatatcGGGAAACTTGCTAAGTACTTTTTAATGAGGCAACAGACACATTTACATTTGTAATGGAACACTGCTGAATTAGTGCTTAATGCAAGTTTTAATCTTGTTATGTCTCTCAGATTCTAAATAAGCatctaaaactattttttttatatcagagaacaatttaatcAATGTACTCTATGGCACATTTAAATATCCTTTTTTAGATCAGAAATGACagattctaaaataaaaacatt

Function

symbol description
fstl1b Predicted to enable calcium ion binding activity. Acts upstream of or within dorsal/ventral pattern formation; notochord cell differentiation; and regulation of BMP signaling pathway. Predicted to be located in extracellular region. Is expressed in several structures, including axis; central nervous system; fin; head mesenchyme; and mesoderm. Orthologous to human FSTL1 (follistatin like 1).

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0030510 regulation of BMP signaling pathway biological_process
GO:0009953 dorsal/ventral pattern formation biological_process
GO:0060034 notochord cell differentiation biological_process
GO:0030903 notochord development biological_process
GO:0005509 calcium ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3029 Predicted to enable calcium ion binding activity. Acts upstream of or within dorsal/ventral pattern formation; notochord cell differentiation; and regulation of BMP signaling pathway. Predicted to be located in extracellular region. Is expressed in several structures, including axis; central nervous system; fin; head mesenchyme; and mesoderm. Orthologous to human FSTL1 (follistatin like 1).

Ensembl:

ensembl_id ENSDARG00000039576

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073934 False 4711 mRNA 0.39 11 9735493 9842149
TCONS_00073935 False 755 processed_transcript 0.49 8 9743559 9805319
TCONS_00073936 True 1166 processed_transcript 0.39 4 9770335 9805319

Neighbor

gene id symbol gene type direction distance location
XLOC_037656 lrrc58b coding downstream 3281 9719225 ~ 9732212 (-)
XLOC_037655 gpr156 coding downstream 29981 9675926 ~ 9705512 (-)
XLOC_037654 gsk3ba coding downstream 64249 9577743 ~ 9671244 (-)
XLOC_037653 si:ch211-214p13.9 coding downstream 315789 9415660 ~ 9419704 (-)
XLOC_037652 si:ch211-214p13.9 coding downstream 320493 9411009 ~ 9415000 (-)
XLOC_037658 prmt2 coding upstream 110914 9953063 ~ 9960940 (-)
XLOC_037659 ugt1a1 coding upstream 127838 9969987 ~ 10003782 (-)
XLOC_037660 spopla coding upstream 208741 10050890 ~ 10068105 (-)
XLOC_037661 hnmt coding upstream 296047 10138196 ~ 10145880 (-)
XLOC_037662 thsd7ba coding upstream 310671 10152820 ~ 10532591 (-)
XLOC_037651 AL954142.4 non-coding downstream 364627 9355372 ~ 9370866 (-)
XLOC_037649 NA non-coding downstream 446423 9286419 ~ 9289070 (-)
XLOC_037645 NA non-coding downstream 684978 9026383 ~ 9050515 (-)
XLOC_037644 BX537313.1 non-coding downstream 711224 9009123 ~ 9024269 (-)
XLOC_037638 NA non-coding downstream 1449285 8284155 ~ 8286208 (-)
XLOC_037663 NA non-coding upstream 526231 10368380 ~ 10370625 (-)
XLOC_037667 BX000444.1 non-coding upstream 1003769 10845918 ~ 10846549 (-)
XLOC_037671 NA non-coding upstream 1729163 11571312 ~ 11572354 (-)
XLOC_037673 NA non-coding upstream 1753838 11595987 ~ 11655031 (-)
XLOC_037675 NA non-coding upstream 1980230 11822379 ~ 11855305 (-)

Expression

Expression of XLOC_037657(fstl1b) in the Zebrafish Sample from each Developmental Stage of PRJEB12982

Boxplot with 18 boxes. Box plot charts are typically used to display groups of statistical data. Each data point in the chart can have up to 5 values: minimum, lower quartile, median, upper quartile, and maximum.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Expression of XLOC_037657(fstl1b) in the Zebrafish Sample of PRJEB12982

Bar chart with 360 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network