Gene
RNA
| Item | Value |
|---|---|
| gene id | G1846050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 24841346 ~ 24841760 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2113415 | True | 415 | lncRNA | 0.40 | 1 | 24841346 | 24841760 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502482 | LOC106607268 | coding | upstream | 69266 | 24769852 ~ 24772080 (+) |
| LOC110502480 | LOC106607275 | coding | upstream | 88396 | 24739716 ~ 24752950 (+) |
| LOC110502478 | LOC106607248 | coding | upstream | 110111 | 24701721 ~ 24731235 (+) |
| LOC110502476 | LOC106605659 | coding | upstream | 334790 | 24430642 ~ 24506556 (+) |
| LOC110502474 | LOC106607224 | coding | upstream | 557300 | 24194714 ~ 24284046 (+) |
| LOC110502484 | LOC106607303 | coding | downstream | 4219 | 24845979 ~ 24918794 (+) |
| LOC110502488 | LOC106607400 | coding | downstream | 537613 | 25379373 ~ 25408777 (+) |
| LOC110503058 | NA | coding | downstream | 573258 | 25415018 ~ 25418542 (+) |
| adam12 | LOC106607406 | coding | downstream | 713122 | 25554882 ~ 25701103 (+) |
| dhx32b | dhx32 | coding | downstream | 872325 | 25714085 ~ 25721003 (+) |
| G1846048 | NA | non-coding | upstream | 789 | 24840183 ~ 24840557 (+) |
| G1846046 | NA | non-coding | upstream | 2937 | 24838203 ~ 24838409 (+) |
| G1846029 | NA | non-coding | upstream | 18059 | 24823025 ~ 24823287 (+) |
| G1845877 | NA | non-coding | upstream | 25795 | 24746758 ~ 24815551 (+) |
| G1845184 | NA | non-coding | upstream | 299582 | 24444180 ~ 24541764 (+) |
| G1846051 | NA | non-coding | downstream | 1728 | 24843488 ~ 24843690 (+) |
| G1846234 | NA | non-coding | downstream | 147285 | 24989045 ~ 24989483 (+) |
| G1846237 | NA | non-coding | downstream | 149387 | 24991147 ~ 24991377 (+) |
| G1846244 | NA | non-coding | downstream | 153713 | 24995473 ~ 24995740 (+) |
| G1846282 | NA | non-coding | downstream | 181331 | 25023091 ~ 25023413 (+) |
| G1845108 | NA | other | upstream | 487100 | 24326264 ~ 24354246 (+) |
| G1844044 | LOC106607169 | other | upstream | 1494857 | 23345044 ~ 23346489 (+) |
| G1840558 | fbxo28 | other | upstream | 4056143 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 4324460 | 20358591 ~ 20516930 (+) |
| G1839872 | NA | other | upstream | 4776359 | 20062064 ~ 20064987 (+) |
| G1849208 | LOC106607606 | other | downstream | 2432578 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 3148514 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | other | downstream | 3160115 | 28001291 ~ 28078254 (+) |
| LOC110502541 | LOC106607837 | other | downstream | 3656263 | 28497576 ~ 28571528 (+) |
| G1851386 | NA | other | downstream | 4201601 | 29043361 ~ 29075998 (+) |
