Gene
RNA
| Item | Value |
|---|---|
| gene id | G1846180 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 24948580 ~ 24948779 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2113557 | True | 200 | lncRNA | 0.37 | 1 | 24948580 | 24948779 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943844 | NA | coding | downstream | 102376 | 24839909 ~ 24846204 (-) |
| LOC110502483 | LOC106607298 | coding | downstream | 135222 | 24806973 ~ 24813358 (-) |
| LOC110502481 | smndc1 | coding | downstream | 181810 | 24754565 ~ 24766770 (-) |
| LOC110502477 | LOC106608714 | coding | downstream | 317999 | 24520546 ~ 24630581 (-) |
| LOC110502475 | LOC106607228 | coding | downstream | 587365 | 24292899 ~ 24361215 (-) |
| gnrh1 | gnrh1 | coding | upstream | 178832 | 25127611 ~ 25128951 (-) |
| LOC110502487 | LOC106607391 | coding | upstream | 182477 | 25131256 ~ 25192325 (-) |
| LOC110503059 | NA | coding | upstream | 468585 | 25417364 ~ 25418599 (-) |
| LOC110503093 | NA | coding | upstream | 754477 | 25703256 ~ 25704420 (-) |
| LOC110503094 | edrf1 | coding | upstream | 779709 | 25728488 ~ 25735408 (-) |
| G1846126 | LOC106577027 | non-coding | downstream | 59065 | 24885730 ~ 24889515 (-) |
| G1846045 | NA | non-coding | downstream | 110783 | 24836598 ~ 24837797 (-) |
| G1846027 | NA | non-coding | downstream | 128504 | 24819302 ~ 24820076 (-) |
| G1845988 | NA | non-coding | downstream | 195736 | 24751032 ~ 24752844 (-) |
| G1845784 | NA | non-coding | downstream | 325887 | 24614539 ~ 24622693 (-) |
| G1846283 | NA | non-coding | upstream | 74520 | 25023299 ~ 25023511 (-) |
| G1846287 | NA | non-coding | upstream | 77130 | 25025909 ~ 25026139 (-) |
| G1846483 | NA | non-coding | upstream | 175998 | 25124777 ~ 25125110 (-) |
| G1846446 | NA | non-coding | upstream | 180823 | 25129602 ~ 25130960 (-) |
| G1846518 | NA | non-coding | upstream | 246883 | 25195662 ~ 25195874 (-) |
| LOC110502462 | LOC106607169 | other | downstream | 1602809 | 23344353 ~ 23358461 (-) |
| G1843946 | NA | other | downstream | 1715157 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 1730310 | 23213905 ~ 23218749 (-) |
| G1841959 | NA | other | downstream | 3576781 | 21345514 ~ 21371799 (-) |
| G1841694 | NA | other | downstream | 4004965 | 20943307 ~ 20943615 (-) |
| G1846858 | NA | other | upstream | 491028 | 25439807 ~ 25440387 (-) |
| G1850441 | NA | other | upstream | 3126146 | 28074925 ~ 28078251 (-) |
| LOC110502553 | NA | other | upstream | 3975960 | 28919846 ~ 28932600 (-) |
| LOC110502574 | LOC106608078 | other | upstream | 6202830 | 31151609 ~ 31239202 (-) |
| G1854905 | NA | other | upstream | 6268818 | 31217597 ~ 31218171 (-) |
