G1847862


Basic Information

Item Value
gene id G1847862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 26220204 ~ 26223088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2115325
gggattaacagcaagattacctttaaaacattataagatacatgtatgtttgaggaattttaattatgagatttctgttgttttgaatttggcgccctgcactttcactggctgatgtcatatcatcccgttaacgggattgcagccctaagaaatTTTAACAGGCAGTGACCTTCATACTGTATAGCAGAACTAATTCACTGTCACGAATgtcgtcagggaaatgaccggaccaaggtgcagcgtggtaagcgtacatttatttttatttagaatatcaccaacaaaaacaagaaacaactAAATGAAtgtgaagcttactagggctatacaggccactaacaaagacaactacccacaactaaggcggcaaaacaggctgcccaagtatgattcccaattagagacaacgatagacagctgcctctgattgggaaccacactcggccaaacacacagaaatacaaaacatagaatgcccaccccacatcacaccctgacctaaccaaatagagaaataaaacgtctctctaaggtcagggcgtgacagtcaccATTTGAACGTGATCCATTAACCTGTCCTGTAAAATGTCCTGTAAAATCATTCCCTTGTCACACTTTCTCCTGTTTTGGGCTTTTTAGATGTGGTCACCCTAATTCCACTGGTGGAAACATTGTTACTGCAACATGTTAACACAAacttttcacatgtgaggagaaaAATATTATTTCAACCCCATAGAGGGAAATTTTCAAAGTTGGAGTTTTCTTCCATGTGGAACTGTTAGTTAGATAGTCACGTGATTGTTTTTCCTGTAAACTTGCAATTCCACAAGTGAAAGTGATATTTTAACGTGGAGTTGTTTTTAGAAGTGAAACTGCAAATGTgattctaggaaaccatacacaaaatgtataatttgaccaacttttaggaagaggtcattatTTCGTGGCGTATGTGAatgaagaaaccacatggaaaaagtggtaagcaaaaGAAAATAATGCATTTTCACCAATTCAAAATAATGTATTGTTTTAAGAGGCTTCATGGTATATAAACCAAAGTAGATACTTTTAAAATTGctttatacatcagttggggtcttgATAAGcatcaatatgaggtcctaaacctagcatgaaagtgcatcctagctgtgtgggctaataatATTATAGTCAACATATTTGCATTGggataagttgagccaatggccatggggtaagttgggccaaagGTTGAGCCAATGTGCAGTTGAGaaaattgaagtgttttcttcccaggcttAATTAAAGGCATTAAcactgggatatgaggtaacaacagggcctggcaTCTGTTAAAACTGTCAAACAAAGTACAATGTGTTTGTTAGGTGGAAAGCCTGTATAAAAAAGATGCTTAAAATGTTTCAAAGACaaaagtgattgtgattgtgttgaattaggattgggaaataaagatagacatggttaTAAAAAGGTAGTGATcatatttcattcagtacagacATTTGTACATAGCTTAACTTACACTGTCCAGCTGCCAAGAGACCAACATGTTTTGGACAAGCAatttttcaaaactgtaatgtttacagtcATTTTGATCATTttcagggatacacaacatcctgaaataccCTGAGTATACAACactttaagaacacctgctctttccatgacatagactgaccaggtgaatccaggtgaaagctattatcccttattgatgtcacttgttaaatccacttctgtcagtgtagatgaaggggaggagacaggattgCTAAGCCCTGAGACAATTGAGACCTGGATTGTGTAAGTGTGTcaatcagagggtgaatgggcaagacaaaatatttaagtgcctttgaacagggtaggtgtcaggcgcactggtttgtgtcaagaactgcaacgctgctgggtttttcacgctcaacagtttcccatgtgtatcaagaatggtccaccccccaaaggacatccagctaacttgacacaactatggaaagcattggagtctacatgggccagcattccagtggaacgctttcgacaccttatagagtccatgccctgacgaattgaggctgttctgagggcaaaggtggggggggtgcatctcaatattaggaatgtgttcctagTGTTTGGTATATCTTTGTTAGAacgaatactatatttcccttgacagagtgaagctgaatgtaaaaaatggctcaacttaccccactcccCCCTACACAATTGAGTGCCTTTCAAACTAAAGATCAAATCACAGTGAGAGAGATAACATGTCTCTGTACCACCAATTGGAACATCTGGATGGATAACTACAATATGTGGGAATATAAAGCGTTTGATAATTATTTTCTTTGGTATGATGCCTtgtgtgatatactgtagctgcaaAGTGAATACAGTGACTCAGCGTCATAGTCGTGTATGATGGTAGAGTCTGGTAGGCTTGTAAATGTGGAGTTATCAAACTGTTTTTGAATATTATTAAATTGTATTATAATATCATGTATAAAACAgagtatttcttttttttttttacgtgatAGAACAGCAGTCATATCCGTACCTTAAAATGTGTTTTAACATATTCTATTTTTACATTTCTAACACCCTCAGTATGACTACTTCGTCTATAGAGCAGTCACCTGAGCATTCTGTAGATTACATTTTCACTTGTAAAGTTTCTTTTGGTGATGTTGGCAACCAGGGTAAAGTGTATTGCTTTCATTTCCTTTGAATCTGTGACaccctacagtagatagatgaacaagtactgtata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2115325 True 2813 lncRNA 0.38 2 26220204 26223088

Neighbor

gene id symbol gene type direction distance location
LOC110502496 fam175b coding downstream 272218 25939726 ~ 25947986 (-)
LOC110502495 zranb1 coding downstream 287730 25884956 ~ 25932474 (-)
LOC110503094 edrf1 coding downstream 485108 25728488 ~ 25735408 (-)
LOC110503093 NA coding downstream 515784 25703256 ~ 25704420 (-)
LOC110503059 NA coding downstream 801605 25417364 ~ 25418599 (-)
LOC110502501 gpr26 coding upstream 3542 26226630 ~ 26230546 (-)
LOC110502502 hmx2 coding upstream 171145 26387522 ~ 26398133 (-)
LOC110502503 hmx3 coding upstream 180525 26403613 ~ 26406554 (-)
cuzd1.2 LOC106607512 coding upstream 233922 26457010 ~ 26465890 (-)
LOC110502513 LOC106607606 coding upstream 1051464 27252967 ~ 27310171 (-)
G1847581 NA non-coding downstream 201908 26017999 ~ 26018296 (-)
G1847580 NA non-coding downstream 202513 26017460 ~ 26017691 (-)
G1847579 NA non-coding downstream 203607 26015911 ~ 26016597 (-)
G1847576 NA non-coding downstream 205116 26014823 ~ 26015088 (-)
G1847511 NA non-coding downstream 314822 25899996 ~ 25905382 (-)
G1847886 NA non-coding upstream 33927 26257015 ~ 26257238 (-)
G1847904 NA non-coding upstream 49332 26272420 ~ 26272765 (-)
G1847931 NA non-coding upstream 67451 26290539 ~ 26290741 (-)
G1847933 NA non-coding upstream 68055 26291143 ~ 26291366 (-)
G1847935 NA non-coding upstream 68820 26291908 ~ 26292175 (-)
G1846858 NA other downstream 779817 25439807 ~ 25440387 (-)
LOC110502462 LOC106607169 other downstream 2874433 23344353 ~ 23358461 (-)
G1843946 NA other downstream 2986781 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other downstream 3001934 23213905 ~ 23218749 (-)
G1841959 NA other downstream 4848405 21345514 ~ 21371799 (-)
G1850441 NA other upstream 1851837 28074925 ~ 28078251 (-)
LOC110502553 NA other upstream 2701651 28919846 ~ 28932600 (-)
LOC110502574 LOC106608078 other upstream 4928521 31151609 ~ 31239202 (-)
G1854905 NA other upstream 4994509 31217597 ~ 31218171 (-)
G1855326 NA other upstream 5756909 31979997 ~ 31981333 (-)

Expression


Co-expression Network