Gene
RNA
| Item | Value |
|---|---|
| gene id | G1848074 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 26401634 ~ 26401848 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2115541 | True | 215 | lncRNA | 0.37 | 1 | 26401634 | 26401848 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502499 | chst15 | coding | upstream | 235887 | 26129692 ~ 26165747 (+) |
| LOC110503095 | nkx1-2 | coding | upstream | 311566 | 26086792 ~ 26090068 (+) |
| LOC110502498 | fam53b | coding | upstream | 398118 | 25965470 ~ 26003516 (+) |
| eef1akmt2 | mettl10 | coding | upstream | 444904 | 25948315 ~ 25956730 (+) |
| ctbp2a | ctbp2 | coding | upstream | 517014 | 25764960 ~ 25884620 (+) |
| LOC110502505 | LOC106607516 | coding | downstream | 39249 | 26441097 ~ 26456885 (+) |
| LOC118943853 | NA | coding | downstream | 62694 | 26464542 ~ 26469614 (+) |
| LOC110502508 | LOC106607536 | coding | downstream | 69512 | 26471360 ~ 26529362 (+) |
| LOC110502507 | LOC106607527 | coding | downstream | 113268 | 26515116 ~ 26545433 (+) |
| LOC110502510 | LOC106607591 | coding | downstream | 163438 | 26565286 ~ 26603085 (+) |
| G1848062 | NA | non-coding | upstream | 15944 | 26385362 ~ 26385690 (+) |
| G1848045 | NA | non-coding | upstream | 27793 | 26373557 ~ 26373841 (+) |
| G1847987 | NA | non-coding | upstream | 61455 | 26339977 ~ 26340179 (+) |
| G1847890 | NA | non-coding | upstream | 142721 | 26258668 ~ 26258913 (+) |
| G1847687 | NA | non-coding | upstream | 288809 | 26112593 ~ 26112825 (+) |
| G1848088 | NA | non-coding | downstream | 24999 | 26426847 ~ 26427053 (+) |
| G1848354 | NA | non-coding | downstream | 301667 | 26703515 ~ 26707704 (+) |
| G1848401 | NA | non-coding | downstream | 365123 | 26766971 ~ 26819859 (+) |
| G1848400 | NA | non-coding | downstream | 374125 | 26775973 ~ 26907050 (+) |
| G1845108 | NA | other | upstream | 2047388 | 24326264 ~ 24354246 (+) |
| G1844044 | LOC106607169 | other | upstream | 3055145 | 23345044 ~ 23346489 (+) |
| G1840558 | fbxo28 | other | upstream | 5616431 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 5884748 | 20358591 ~ 20516930 (+) |
| G1839872 | NA | other | upstream | 6336647 | 20062064 ~ 20064987 (+) |
| G1849208 | LOC106607606 | other | downstream | 872490 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 1588426 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | other | downstream | 1600027 | 28001291 ~ 28078254 (+) |
| LOC110502541 | LOC106607837 | other | downstream | 2096175 | 28497576 ~ 28571528 (+) |
| G1851386 | NA | other | downstream | 2641513 | 29043361 ~ 29075998 (+) |
