Gene
RNA
| Item | Value |
|---|---|
| gene id | G1848088 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 26426847 ~ 26427053 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2115555 | True | 207 | lncRNA | 0.39 | 1 | 26426847 | 26427053 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502499 | chst15 | coding | upstream | 261100 | 26129692 ~ 26165747 (+) |
| LOC110503095 | nkx1-2 | coding | upstream | 336779 | 26086792 ~ 26090068 (+) |
| LOC110502498 | fam53b | coding | upstream | 423331 | 25965470 ~ 26003516 (+) |
| eef1akmt2 | mettl10 | coding | upstream | 470117 | 25948315 ~ 25956730 (+) |
| ctbp2a | ctbp2 | coding | upstream | 542227 | 25764960 ~ 25884620 (+) |
| LOC110502505 | LOC106607516 | coding | downstream | 14044 | 26441097 ~ 26456885 (+) |
| LOC118943853 | NA | coding | downstream | 37489 | 26464542 ~ 26469614 (+) |
| LOC110502508 | LOC106607536 | coding | downstream | 44307 | 26471360 ~ 26529362 (+) |
| LOC110502507 | LOC106607527 | coding | downstream | 88063 | 26515116 ~ 26545433 (+) |
| LOC110502510 | LOC106607591 | coding | downstream | 138233 | 26565286 ~ 26603085 (+) |
| G1848074 | NA | non-coding | upstream | 24999 | 26401634 ~ 26401848 (+) |
| G1848062 | NA | non-coding | upstream | 41157 | 26385362 ~ 26385690 (+) |
| G1848045 | NA | non-coding | upstream | 53006 | 26373557 ~ 26373841 (+) |
| G1847987 | NA | non-coding | upstream | 86668 | 26339977 ~ 26340179 (+) |
| G1847890 | NA | non-coding | upstream | 167934 | 26258668 ~ 26258913 (+) |
| G1848354 | NA | non-coding | downstream | 276462 | 26703515 ~ 26707704 (+) |
| G1848401 | NA | non-coding | downstream | 339918 | 26766971 ~ 26819859 (+) |
| G1848400 | NA | non-coding | downstream | 348920 | 26775973 ~ 26907050 (+) |
| G1848408 | NA | non-coding | downstream | 356329 | 26783382 ~ 26783783 (+) |
| G1845108 | NA | other | upstream | 2072601 | 24326264 ~ 24354246 (+) |
| G1844044 | LOC106607169 | other | upstream | 3080358 | 23345044 ~ 23346489 (+) |
| G1840558 | fbxo28 | other | upstream | 5641644 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 5909961 | 20358591 ~ 20516930 (+) |
| G1839872 | NA | other | upstream | 6361860 | 20062064 ~ 20064987 (+) |
| G1849208 | LOC106607606 | other | downstream | 847285 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 1563221 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | other | downstream | 1574822 | 28001291 ~ 28078254 (+) |
| LOC110502541 | LOC106607837 | other | downstream | 2070970 | 28497576 ~ 28571528 (+) |
| G1851386 | NA | other | downstream | 2616308 | 29043361 ~ 29075998 (+) |
