Gene
RNA
| Item | Value |
|---|---|
| gene id | G1848531 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 26969151 ~ 26971834 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2116030 | True | 409 | lncRNA | 0.47 | 3 | 26969151 | 26971834 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502510 | LOC106607591 | coding | upstream | 366066 | 26565286 ~ 26603085 (+) |
| LOC110502507 | LOC106607527 | coding | upstream | 423718 | 26515116 ~ 26545433 (+) |
| LOC110502508 | LOC106607536 | coding | upstream | 439789 | 26471360 ~ 26529362 (+) |
| LOC118943853 | NA | coding | upstream | 499537 | 26464542 ~ 26469614 (+) |
| LOC110502505 | LOC106607516 | coding | upstream | 512266 | 26441097 ~ 26456885 (+) |
| LOC110502514 | LOC106608765 | coding | downstream | 408425 | 27380259 ~ 27398338 (+) |
| LOC110502516 | LOC106607607 | coding | downstream | 429079 | 27400913 ~ 27414490 (+) |
| ecd | ecd | coding | downstream | 462978 | 27434812 ~ 27448641 (+) |
| LOC110503096 | LOC106577060 | coding | downstream | 501817 | 27473651 ~ 27485960 (+) |
| LOC110502521 | LOC106607666 | coding | downstream | 517379 | 27489213 ~ 27505393 (+) |
| G1848400 | NA | non-coding | upstream | 62101 | 26775973 ~ 26907050 (+) |
| G1848401 | NA | non-coding | upstream | 149292 | 26766971 ~ 26819859 (+) |
| G1848408 | NA | non-coding | upstream | 185368 | 26783382 ~ 26783783 (+) |
| G1848354 | NA | non-coding | upstream | 261447 | 26703515 ~ 26707704 (+) |
| G1849101 | NA | non-coding | downstream | 208300 | 27180134 ~ 27182928 (+) |
| G1849129 | NA | non-coding | downstream | 227953 | 27199787 ~ 27200000 (+) |
| G1849299 | NA | non-coding | downstream | 450370 | 27422204 ~ 27424989 (+) |
| G1849304 | NA | non-coding | downstream | 477225 | 27449059 ~ 27456847 (+) |
| G1845108 | NA | other | upstream | 2614905 | 24326264 ~ 24354246 (+) |
| G1844044 | LOC106607169 | other | upstream | 3622662 | 23345044 ~ 23346489 (+) |
| G1840558 | fbxo28 | other | upstream | 6183948 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 6452265 | 20358591 ~ 20516930 (+) |
| G1839872 | NA | other | upstream | 6904164 | 20062064 ~ 20064987 (+) |
| G1849208 | LOC106607606 | other | downstream | 302504 | 27274338 ~ 27276259 (+) |
| LOC110502527 | LOC106607701 | other | downstream | 1018440 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | other | downstream | 1030041 | 28001291 ~ 28078254 (+) |
| LOC110502541 | LOC106607837 | other | downstream | 1526189 | 28497576 ~ 28571528 (+) |
| G1851386 | NA | other | downstream | 2071527 | 29043361 ~ 29075998 (+) |
