G1849129


Basic Information

Item Value
gene id G1849129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27199787 ~ 27200000 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2116652
gtatagcacttctctcatcgtttaaaaacaagaaatggacagggacgggggtaaggggggatacctagtcatttttttgcatcatcattgcatgcgatcatcattctcaaagccgctgtttacttccaagatcactttagcaccgccctaaaaacccgattcaaattcaacacaaaccttcaaataggtatgtaatgagacattatataaactc

Function

NR:

description
isobutyryl-CoA dehydrogenase, mitochondrial isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2116652 True 214 lncRNA 0.40 1 27199787 27200000

Neighbor

gene id symbol gene type direction distance location
LOC110502511 LOC106607602 coding upstream 53282 26695559 ~ 27146505 (+)
LOC110502510 LOC106607591 coding upstream 596702 26565286 ~ 26603085 (+)
LOC110502507 LOC106607527 coding upstream 654354 26515116 ~ 26545433 (+)
LOC110502508 LOC106607536 coding upstream 670425 26471360 ~ 26529362 (+)
LOC118943853 NA coding upstream 730173 26464542 ~ 26469614 (+)
LOC110502514 LOC106608765 coding downstream 180259 27380259 ~ 27398338 (+)
LOC110502516 LOC106607607 coding downstream 200913 27400913 ~ 27414490 (+)
ecd ecd coding downstream 234812 27434812 ~ 27448641 (+)
LOC110503096 LOC106577060 coding downstream 273651 27473651 ~ 27485960 (+)
LOC110502521 LOC106607666 coding downstream 289213 27489213 ~ 27505393 (+)
G1849101 NA non-coding upstream 16859 27180134 ~ 27182928 (+)
G1848531 NA non-coding upstream 227953 26969151 ~ 26971834 (+)
G1848400 NA non-coding upstream 292737 26775973 ~ 26907050 (+)
G1848401 NA non-coding upstream 379928 26766971 ~ 26819859 (+)
G1848408 NA non-coding upstream 416004 26783382 ~ 26783783 (+)
G1849299 NA non-coding downstream 222204 27422204 ~ 27424989 (+)
G1849304 NA non-coding downstream 249059 27449059 ~ 27456847 (+)
G1849558 NA non-coding downstream 358839 27558839 ~ 27559542 (+)
G1845108 NA other upstream 2845541 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 3853298 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 6414584 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 6682901 20358591 ~ 20516930 (+)
G1839872 NA other upstream 7134800 20062064 ~ 20064987 (+)
G1849208 LOC106607606 other downstream 74338 27274338 ~ 27276259 (+)
LOC110502527 LOC106607701 other downstream 790274 27990245 ~ 27993189 (+)
LOC110502528 bic1a other downstream 801875 28001291 ~ 28078254 (+)
LOC110502541 LOC106607837 other downstream 1298023 28497576 ~ 28571528 (+)
G1851386 NA other downstream 1843361 29043361 ~ 29075998 (+)

Expression


Co-expression Network