G1849299


Basic Information

Item Value
gene id G1849299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27422204 ~ 27424989 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2116832
TTTATTATTCTATATAAGATTCTGGGATAAACTTCAAAAGGAATCCATACAGAACTATGCTGCATTTCAAGCTTTATTAATGCCATCTACAAGGGAGACCATCCAGTGCAACCTAACTCTATAAAGAAGTCAAATACCTCCATGTTAGTTGGTGCTCCTGACTGTTGTTGAAGCCATAGAAATAGAAGGGGACCTGCAGTTCTGTTTTGGAAAATATACATAAAAACCTTCCATCTCAGTCATAATTAGGAAATGCAAAGGAGCGCCAATATATCTTGTGTTAAGCACAAGGGACTAGAAACATAAATGTGCTTATAAAACCCTATTACATTTAGCAGAAATCTTACACGTTTCCCTGCACAAAACCTTGAAGTTAAGACAAGGTAGAAGGTCAAATTAGGATTAAAACTTGTTACCTGCATGCCCTCTAGTCACACATCTTTCACGTATTTATATAAAAATTGCCTGACTGATCTAGGCTCAGCTAGTCCCTCTGCTGAAAACAACATATGGCTTCTACTGCAGTGAGGACCCAGTACTAATACAGCCCCTCTATTCCCTCACATGTCTCCTGTGGCTTACACTAAGCCCTCATCACAAAAAGGCTTGTGAGGAAAACACCAAATACCTACCCATTTAGTTAGCGTCTAAAGCTTGTCCTGTTAAGGTATGCTATGTGAAACCCAGAGGTTTTGTGCTCGTCTTTTTAtacatgggaaaataaaaaaatcatgtCCTTAGAAAAGTACAAAGCAGCCTGACGAAGTGTGTCAGTGTGCAAAATGCTTTTGACTTCCCATTACCTGCATAGAATCACTTAAGAGTATAGAGATAGATCAGAGAAAAGAACAGACAATATACATTCACACATATACATCCAAACCATaggtacagtacacagtacacacaataccgttcaaaagttTGGTAAATGAGACAGTTTACTATCTTTGGCAGCCAGGTAAGCTGAGAGTtccaaaatacaaaaataaggcTCTCGAAAAACAAAAAGCATCAATAAATAAAATCACCAAACAGTACATTGTACAAAAGATCTGCTTCTGTATAAAGTGTCGTTTGAGGGCACCGTTGGGATTGGAAGCAGGGCTTGCACCCTGCTGTGCTGAGGAGAGTGTGGTTAGAGAAGGTGGAGGTGGGTGAGGTCAAAGCAGCTACAACCCAGGTCTGCTACTGCGGGACATGAAGCCACCCCGGTTGTGGGAGCTTGCTGGGACTGAAACAGGCACCAGTAGA

Function

NR:

description
PREDICTED: protein FAM149B1-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2116832 True 1254 lncRNA 0.41 2 27422204 27424989

Neighbor

gene id symbol gene type direction distance location
LOC110502516 LOC106607607 coding upstream 7714 27400913 ~ 27414490 (+)
LOC110502514 LOC106608765 coding upstream 23866 27380259 ~ 27398338 (+)
LOC110502511 LOC106607602 coding upstream 275699 26695559 ~ 27146505 (+)
LOC110502510 LOC106607591 coding upstream 819119 26565286 ~ 26603085 (+)
LOC110502507 LOC106607527 coding upstream 876771 26515116 ~ 26545433 (+)
ecd ecd coding downstream 9823 27434812 ~ 27448641 (+)
LOC110503096 LOC106577060 coding downstream 48662 27473651 ~ 27485960 (+)
LOC110502521 LOC106607666 coding downstream 64224 27489213 ~ 27505393 (+)
LOC110502522 NA coding downstream 83406 27508395 ~ 27516541 (+)
LOC110502523 LOC106607673 coding downstream 340829 27765818 ~ 27769060 (+)
G1849129 NA non-coding upstream 222204 27199787 ~ 27200000 (+)
G1849101 NA non-coding upstream 239276 27180134 ~ 27182928 (+)
G1848531 NA non-coding upstream 450370 26969151 ~ 26971834 (+)
G1848400 NA non-coding upstream 515154 26775973 ~ 26907050 (+)
G1849304 NA non-coding downstream 24070 27449059 ~ 27456847 (+)
G1849558 NA non-coding downstream 133850 27558839 ~ 27559542 (+)
G1849565 NA non-coding downstream 138872 27563861 ~ 27564082 (+)
G1849592 NA non-coding downstream 159499 27584488 ~ 27584826 (+)
G1849208 LOC106607606 other upstream 145945 27274338 ~ 27276259 (+)
G1845108 NA other upstream 3067958 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 4075715 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 6637001 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 6905318 20358591 ~ 20516930 (+)
LOC110502527 LOC106607701 other downstream 565285 27990245 ~ 27993189 (+)
LOC110502528 bic1a other downstream 576886 28001291 ~ 28078254 (+)
LOC110502541 LOC106607837 other downstream 1073034 28497576 ~ 28571528 (+)
G1851386 NA other downstream 1618372 29043361 ~ 29075998 (+)
G1852590 NA other downstream 2593501 30018490 ~ 30025046 (+)

Expression


Co-expression Network