Gene
RNA
| Item | Value |
|---|---|
| gene id | G1849524 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 27489311 ~ 27493373 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| alpha-actinin-2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2117091 | True | 305 | lncRNA | 0.43 | 2 | 27489311 | 27493373 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-248a14.8 | LOC106608780 | coding | downstream | 35431 | 27449622 ~ 27453880 (-) |
| LOC110502517 | LOC106607615 | coding | downstream | 53469 | 27423892 ~ 27435842 (-) |
| LOC110502513 | LOC106607606 | coding | downstream | 179140 | 27252967 ~ 27310171 (-) |
| cuzd1.2 | LOC106607512 | coding | downstream | 1023421 | 26457010 ~ 26465890 (-) |
| LOC110502503 | hmx3 | coding | downstream | 1082757 | 26403613 ~ 26406554 (-) |
| LOC110502526 | LOC106607693 | coding | upstream | 356731 | 27850104 ~ 27859306 (-) |
| LOC110502525 | LOC106607696 | coding | upstream | 366719 | 27860092 ~ 27983425 (-) |
| LOC110502532 | NA | coding | upstream | 622222 | 28115595 ~ 28120442 (-) |
| fam13c | LOC106607716 | coding | upstream | 645795 | 28139168 ~ 28148897 (-) |
| LOC110502533 | mot9 | coding | upstream | 687713 | 28181086 ~ 28197583 (-) |
| G1849416 | NA | non-coding | downstream | 166481 | 27322353 ~ 27322830 (-) |
| G1849410 | NA | non-coding | downstream | 171692 | 27317419 ~ 27317619 (-) |
| G1849397 | NA | non-coding | downstream | 198985 | 27290100 ~ 27290326 (-) |
| G1849390 | NA | non-coding | downstream | 204537 | 27284469 ~ 27284774 (-) |
| G1849386 | NA | non-coding | downstream | 206778 | 27282313 ~ 27282533 (-) |
| G1849555 | NA | non-coding | upstream | 61568 | 27554941 ~ 27555153 (-) |
| G1849591 | NA | non-coding | upstream | 89955 | 27583328 ~ 27583726 (-) |
| G1849601 | NA | non-coding | upstream | 97426 | 27590799 ~ 27590998 (-) |
| G1849604 | NA | non-coding | upstream | 100076 | 27593449 ~ 27593665 (-) |
| G1849622 | LOC107663003 | non-coding | upstream | 109434 | 27602807 ~ 27603044 (-) |
| G1846858 | NA | other | downstream | 2048924 | 25439807 ~ 25440387 (-) |
| LOC110502462 | LOC106607169 | other | downstream | 4143540 | 23344353 ~ 23358461 (-) |
| G1843946 | NA | other | downstream | 4255888 | 23182987 ~ 23233423 (-) |
| LOC110502461 | LOC106607165 | other | downstream | 4271041 | 23213905 ~ 23218749 (-) |
| G1841959 | NA | other | downstream | 6117512 | 21345514 ~ 21371799 (-) |
| G1850441 | NA | other | upstream | 581552 | 28074925 ~ 28078251 (-) |
| LOC110502553 | NA | other | upstream | 1431366 | 28919846 ~ 28932600 (-) |
| LOC110502574 | LOC106608078 | other | upstream | 3658236 | 31151609 ~ 31239202 (-) |
| G1854905 | NA | other | upstream | 3724224 | 31217597 ~ 31218171 (-) |
| G1855326 | NA | other | upstream | 4486624 | 31979997 ~ 31981333 (-) |
