G1849565


Basic Information

Item Value
gene id G1849565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27563861 ~ 27564082 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2117133
CCTTTCGTTTGTCTTCTTGAAAATGATCTCAGGCAGAGGTCGACCCTCGCTTTTAATTTGCAGCTTTTCCATATACACCAGAGAATGAAAGaggttcttcaacaaaaagtCAAAAATTTCCAGCAGCATtggccattctaccattctgGTTGAGAAAGCTGCACACTGGTAGCTAGATAACTTCAGTAGCTAACAAggcaaatttaaataaattgcACTAAC

Function

NR:

description
PREDICTED: zinc finger MYM-type protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2117133 True 222 lncRNA 0.39 1 27563861 27564082

Neighbor

gene id symbol gene type direction distance location
LOC110502522 NA coding upstream 47320 27508395 ~ 27516541 (+)
LOC110502521 LOC106607666 coding upstream 58468 27489213 ~ 27505393 (+)
LOC110503096 LOC106577060 coding upstream 77901 27473651 ~ 27485960 (+)
ecd ecd coding upstream 115220 27434812 ~ 27448641 (+)
LOC110502516 LOC106607607 coding upstream 149371 27400913 ~ 27414490 (+)
LOC110502523 LOC106607673 coding downstream 201736 27765818 ~ 27769060 (+)
LOC110503097 LOC106577081 coding downstream 226677 27790759 ~ 27848517 (+)
LOC110502527 LOC106607701 coding downstream 426163 27990245 ~ 27993189 (+)
LOC110502528 bic1a coding downstream 437209 28001291 ~ 28078254 (+)
LOC110502531 LOC106607719 coding downstream 534365 28098447 ~ 28140673 (+)
G1849558 NA non-coding upstream 4319 27558839 ~ 27559542 (+)
G1849304 NA non-coding upstream 107014 27449059 ~ 27456847 (+)
G1849299 NA non-coding upstream 138872 27422204 ~ 27424989 (+)
LOC110502514 LOC106608765 non-coding upstream 166139 27380259 ~ 27398338 (+)
G1849592 NA non-coding downstream 20406 27584488 ~ 27584826 (+)
G1849647 NA non-coding downstream 56236 27620318 ~ 27620535 (+)
G1849652 NA non-coding downstream 60022 27624104 ~ 27624403 (+)
G1849660 NA non-coding downstream 205953 27770035 ~ 27770506 (+)
G1849658 NA non-coding downstream 207837 27771919 ~ 27772208 (+)
G1849208 LOC106607606 other upstream 287602 27274338 ~ 27276259 (+)
G1845108 NA other upstream 3209615 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 4217372 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 6778658 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 7046975 20358591 ~ 20516930 (+)
LOC110502541 LOC106607837 other downstream 933941 28497576 ~ 28571528 (+)
G1851386 NA other downstream 1479279 29043361 ~ 29075998 (+)
G1852590 NA other downstream 2454408 30018490 ~ 30025046 (+)

Expression


Co-expression Network