G1849647


Basic Information

Item Value
gene id G1849647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27620318 ~ 27620535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2117216
actcagacagggagaggttgaaaatgtcagtgaagatatttgccagttggtcagcgcgtgctcgcagtacacgtcctggtaatccttttggccctgtggccttgtgtatgttgacctgttgaaaagtcttactcacatcggctgcggagaacgtgatcacacattcatccggaacagctggtgctgtcatgcatgtttcagtgttacttgcctcgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2117216 True 218 lncRNA 0.50 1 27620318 27620535

Neighbor

gene id symbol gene type direction distance location
LOC110502522 NA coding upstream 103777 27508395 ~ 27516541 (+)
LOC110502521 LOC106607666 coding upstream 114925 27489213 ~ 27505393 (+)
LOC110503096 LOC106577060 coding upstream 134358 27473651 ~ 27485960 (+)
ecd ecd coding upstream 171677 27434812 ~ 27448641 (+)
LOC110502516 LOC106607607 coding upstream 205828 27400913 ~ 27414490 (+)
LOC110502523 LOC106607673 coding downstream 145283 27765818 ~ 27769060 (+)
LOC110503097 LOC106577081 coding downstream 170224 27790759 ~ 27848517 (+)
LOC110502527 LOC106607701 coding downstream 369710 27990245 ~ 27993189 (+)
LOC110502528 bic1a coding downstream 380756 28001291 ~ 28078254 (+)
LOC110502531 LOC106607719 coding downstream 477912 28098447 ~ 28140673 (+)
G1849592 NA non-coding upstream 35492 27584488 ~ 27584826 (+)
G1849565 NA non-coding upstream 56236 27563861 ~ 27564082 (+)
G1849558 NA non-coding upstream 60776 27558839 ~ 27559542 (+)
G1849304 NA non-coding upstream 163471 27449059 ~ 27456847 (+)
G1849652 NA non-coding downstream 3569 27624104 ~ 27624403 (+)
G1849660 NA non-coding downstream 149500 27770035 ~ 27770506 (+)
G1849658 NA non-coding downstream 151384 27771919 ~ 27772208 (+)
G1849821 NA non-coding downstream 253909 27874444 ~ 27876182 (+)
G1849208 LOC106607606 other upstream 344059 27274338 ~ 27276259 (+)
G1845108 NA other upstream 3266072 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 4273829 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 6835115 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 7103432 20358591 ~ 20516930 (+)
LOC110502541 LOC106607837 other downstream 877488 28497576 ~ 28571528 (+)
G1851386 NA other downstream 1422826 29043361 ~ 29075998 (+)
G1852590 NA other downstream 2397955 30018490 ~ 30025046 (+)

Expression


Co-expression Network