G1849652


Basic Information

Item Value
gene id G1849652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27624104 ~ 27624403 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2117221
aatttaaggaatctgcatttcccctttatttaaccaggtaggccagttgagaacaagttctcatttacaactgcaacctggccaggataaagcaaagcagtgtgacaaaaacaacagagttacacataaacaaacgtacagtcaataacacaatagaaaaatatatgtacagcgtgtgcaaatgtaaaagattagggaggtaaggcaataaataggccatagaggcgaaataattacaatttagcattaacactggaatgatagatgtgcaagtagagatactggggtacatatggggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2117221 True 300 lncRNA 0.37 1 27624104 27624403

Neighbor

gene id symbol gene type direction distance location
LOC110502522 NA coding upstream 107563 27508395 ~ 27516541 (+)
LOC110502521 LOC106607666 coding upstream 118711 27489213 ~ 27505393 (+)
LOC110503096 LOC106577060 coding upstream 138144 27473651 ~ 27485960 (+)
ecd ecd coding upstream 175463 27434812 ~ 27448641 (+)
LOC110502516 LOC106607607 coding upstream 209614 27400913 ~ 27414490 (+)
LOC110502523 LOC106607673 coding downstream 141415 27765818 ~ 27769060 (+)
LOC110503097 LOC106577081 coding downstream 166356 27790759 ~ 27848517 (+)
LOC110502527 LOC106607701 coding downstream 365842 27990245 ~ 27993189 (+)
LOC110502528 bic1a coding downstream 376888 28001291 ~ 28078254 (+)
LOC110502531 LOC106607719 coding downstream 474044 28098447 ~ 28140673 (+)
G1849647 NA non-coding upstream 3569 27620318 ~ 27620535 (+)
G1849592 NA non-coding upstream 39278 27584488 ~ 27584826 (+)
G1849565 NA non-coding upstream 60022 27563861 ~ 27564082 (+)
G1849558 NA non-coding upstream 64562 27558839 ~ 27559542 (+)
G1849660 NA non-coding downstream 145632 27770035 ~ 27770506 (+)
G1849658 NA non-coding downstream 147516 27771919 ~ 27772208 (+)
G1849821 NA non-coding downstream 250041 27874444 ~ 27876182 (+)
G1849835 NA non-coding downstream 270726 27895129 ~ 27907142 (+)
G1849208 LOC106607606 other upstream 347845 27274338 ~ 27276259 (+)
G1845108 NA other upstream 3269858 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 4277615 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 6838901 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 7107218 20358591 ~ 20516930 (+)
LOC110502541 LOC106607837 other downstream 873620 28497576 ~ 28571528 (+)
G1851386 NA other downstream 1418958 29043361 ~ 29075998 (+)
G1852590 NA other downstream 2394087 30018490 ~ 30025046 (+)

Expression


Co-expression Network