Gene
RNA
| Item | Value |
|---|---|
| gene id | G1849658 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 27771919 ~ 27772208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2117227 | True | 290 | lncRNA | 0.37 | 1 | 27771919 | 27772208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502523 | LOC106607673 | coding | upstream | 2859 | 27765818 ~ 27769060 (+) |
| LOC110502522 | NA | coding | upstream | 255378 | 27508395 ~ 27516541 (+) |
| LOC110502521 | LOC106607666 | coding | upstream | 266526 | 27489213 ~ 27505393 (+) |
| LOC110503096 | LOC106577060 | coding | upstream | 285959 | 27473651 ~ 27485960 (+) |
| ecd | ecd | coding | upstream | 323278 | 27434812 ~ 27448641 (+) |
| LOC110503097 | LOC106577081 | coding | downstream | 18551 | 27790759 ~ 27848517 (+) |
| LOC110502527 | LOC106607701 | coding | downstream | 218037 | 27990245 ~ 27993189 (+) |
| LOC110502528 | bic1a | coding | downstream | 229083 | 28001291 ~ 28078254 (+) |
| LOC110502531 | LOC106607719 | coding | downstream | 326239 | 28098447 ~ 28140673 (+) |
| LOC110502539 | LOC106607826 | coding | downstream | 690247 | 28462455 ~ 28466290 (+) |
| G1849660 | NA | non-coding | upstream | 1413 | 27770035 ~ 27770506 (+) |
| G1849652 | NA | non-coding | upstream | 147516 | 27624104 ~ 27624403 (+) |
| G1849647 | NA | non-coding | upstream | 151384 | 27620318 ~ 27620535 (+) |
| G1849592 | NA | non-coding | upstream | 187093 | 27584488 ~ 27584826 (+) |
| G1849565 | NA | non-coding | upstream | 207837 | 27563861 ~ 27564082 (+) |
| G1849821 | NA | non-coding | downstream | 102236 | 27874444 ~ 27876182 (+) |
| G1849835 | NA | non-coding | downstream | 122921 | 27895129 ~ 27907142 (+) |
| G1850012 | NA | non-coding | downstream | 456353 | 28228561 ~ 28230666 (+) |
| G1850667 | NA | non-coding | downstream | 689039 | 28461247 ~ 28461479 (+) |
| G1849208 | LOC106607606 | other | upstream | 495660 | 27274338 ~ 27276259 (+) |
| G1845108 | NA | other | upstream | 3417673 | 24326264 ~ 24354246 (+) |
| G1844044 | LOC106607169 | other | upstream | 4425430 | 23345044 ~ 23346489 (+) |
| G1840558 | fbxo28 | other | upstream | 6986716 | 20781865 ~ 20785203 (+) |
| LOC110502429 | ttc27 | other | upstream | 7255033 | 20358591 ~ 20516930 (+) |
| LOC110502541 | LOC106607837 | other | downstream | 725815 | 28497576 ~ 28571528 (+) |
| G1851386 | NA | other | downstream | 1271153 | 29043361 ~ 29075998 (+) |
| G1852590 | NA | other | downstream | 2246282 | 30018490 ~ 30025046 (+) |
