G1849821


Basic Information

Item Value
gene id G1849821
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27874444 ~ 27876182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2117398
GGGGTGTGGGTGGGGCTGTGGGTGCGCACATCATTCTGAGGCCCATATACAGACTGaggcagagagacaaacagaaccCACCAAAGTCAAACTCGAACAACAGTATTTTCAAGTGACCTGTTATTCAGAAGCAATGGATTTATCAGACACTCTAACCTTTCTTGTCTTGTGGGGGTTTTTCATTCTGGAGGACTTCTTTATGTCAACTTCTGTTGTGTTTACACATCCGGGCTGGAGAGCAACAAAAATTAGCAgtataaattaataaaataaacaccTTCAGAGAGCATTCTCTGCTTCTTCTTATTGATTCACTAGCGGCTCAGTTAGGACTGTTTAGTGAACTGTTTAGTGAACCCAGCAAACCATAGCCTACTTCTTCCATTGCAATTTGCTGCATGCGCAGTGAAATATTAATGTAAAATTTCTAACAAAAATTCCAAACAATCAATGTGTCACTGAGAAATAAAACATATTGTCGGTACGTCGTGCATGGTTAAACAAAGGGTACAATCAAGGCATCCTCCAGGATCACGGTGGTTAAGTGGTTTGACGAGGCTGCTGTGAAATCAGAAAGGAACCTGATTATAATGCTCCGAGAATGCATCAATTAATCCTGTTATTTTCCAATTAAGTTCATGGCCGGAGAGGCAGATCCATTCCCGAGTGGAAGCTAATGCTAAGAAGGATATGTGTCTGAATGGATGATGAGGTCAAACAGACCACTGGAGACCTCTATGttaatttttttggggggaggaattgacagtacagtaataacaTTTAGATATTACAGTAGACAAAGAAGAAAGAAAAAATCTCTGCCTTTACCAAGCTCTGAAAATGTGACTATTATCCAAATCCATTACATTATTGACACTGAACGGTGAAGGAAATTGCTTTGAGGACTGAAAAAATGCACAGGTTGTTGACAATTAATATTTCTAAACATGTATGTATGACAAACGACAACAATATTGCACAAAGGAATACTAAGTTTACTCGATTCAATACCTATCGTGGAAGTTCAGCGCTATAGCGCGatttaaatttaaaggcaatgttaccgtgttcacggagactgcattcacagtattcgctgcatatgtcggctcaatcggaaattaacTTAAAATTGTAATTATGCTACAAAGCTGAACTTCAACGATATGGATTTAATTTGAGCACAGCCTCCAATTAACTGAATACTGCAGTGGAAAATTTGCCCAAATACTGTAGCTAGATGTTATGTTATGGAAATAATGTGACTCTTGAAGCATAAGATTTTAAAAGCACAATAAACTCACCACAGGTCTGTGCACATCCCAAAATGCTCTTTCTTGACTATCGAGAATTTTCCTCTCAATCTTATCCCTTTTTTTGTCAACTCTGAGGAGATACACAGTACAGGCAATTACTTTTTTGGTATTTTACAGAAACATATTTTGTGTAATTATTACTGTTTTTTCTTTGCCACTTCCCCTGGCCTAAAATTTGGTGTTATTAGGAAACTGATGAGAAGTGGTAGTTAGAGATGAGGGCATATCAACGCATAGAGTACTACATTTGTTTCATTTGGAAACTTACTTTGCTTGTGCTTCTGCTTGCATAAATATGAACTCCCATTTTCTGGCAAATGCTCTCTGTAGCCT

Function

NR:

description
PREDICTED: regulator of G-protein signaling 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2117398 True 1652 lncRNA 0.38 2 27874444 27876182

Neighbor

gene id symbol gene type direction distance location
LOC110503097 LOC106577081 coding upstream 34105 27790759 ~ 27848517 (+)
LOC110502523 LOC106607673 coding upstream 105384 27765818 ~ 27769060 (+)
LOC110502522 NA coding upstream 357903 27508395 ~ 27516541 (+)
LOC110502521 LOC106607666 coding upstream 369051 27489213 ~ 27505393 (+)
LOC110503096 LOC106577060 coding upstream 388484 27473651 ~ 27485960 (+)
LOC110502527 LOC106607701 coding downstream 114063 27990245 ~ 27993189 (+)
LOC110502528 bic1a coding downstream 125109 28001291 ~ 28078254 (+)
LOC110502531 LOC106607719 coding downstream 222265 28098447 ~ 28140673 (+)
LOC110502539 LOC106607826 coding downstream 586273 28462455 ~ 28466290 (+)
LOC110502541 LOC106607837 coding downstream 621394 28497576 ~ 28571528 (+)
G1849658 NA non-coding upstream 102236 27771919 ~ 27772208 (+)
G1849660 NA non-coding upstream 103938 27770035 ~ 27770506 (+)
G1849652 NA non-coding upstream 250041 27624104 ~ 27624403 (+)
G1849647 NA non-coding upstream 253909 27620318 ~ 27620535 (+)
G1849835 NA non-coding downstream 18947 27895129 ~ 27907142 (+)
G1850012 NA non-coding downstream 352379 28228561 ~ 28230666 (+)
G1850667 NA non-coding downstream 585065 28461247 ~ 28461479 (+)
G1850669 NA non-coding downstream 591112 28467294 ~ 28467615 (+)
G1850688 NA non-coding downstream 618353 28494535 ~ 28494738 (+)
G1849208 LOC106607606 other upstream 598185 27274338 ~ 27276259 (+)
G1845108 NA other upstream 3520198 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 4527955 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 7089241 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 7357558 20358591 ~ 20516930 (+)
G1851386 NA other downstream 1167179 29043361 ~ 29075998 (+)
G1852590 NA other downstream 2142308 30018490 ~ 30025046 (+)

Expression


Co-expression Network