G1849835


Basic Information

Item Value
gene id G1849835
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 27895129 ~ 27907142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2117412
cctttatttaactaggcaagtcagttaagatgtcacaccctgaccatagtttgctttgtatgtttctatgttttggttggtcagggtgtgagctgggtgggcatgctatgttacatgtctagtttgtctagttctatgtttggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatattgaggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2117412 True 209 lncRNA 0.43 3 27895129 27907142

Neighbor

gene id symbol gene type direction distance location
LOC110503097 LOC106577081 coding upstream 54790 27790759 ~ 27848517 (+)
LOC110502523 LOC106607673 coding upstream 126069 27765818 ~ 27769060 (+)
LOC110502522 NA coding upstream 378588 27508395 ~ 27516541 (+)
LOC110502521 LOC106607666 coding upstream 389736 27489213 ~ 27505393 (+)
LOC110503096 LOC106577060 coding upstream 409169 27473651 ~ 27485960 (+)
LOC110502527 LOC106607701 coding downstream 83103 27990245 ~ 27993189 (+)
LOC110502528 bic1a coding downstream 94149 28001291 ~ 28078254 (+)
LOC110502531 LOC106607719 coding downstream 191305 28098447 ~ 28140673 (+)
LOC110502539 LOC106607826 coding downstream 555313 28462455 ~ 28466290 (+)
LOC110502541 LOC106607837 coding downstream 590434 28497576 ~ 28571528 (+)
G1849821 NA non-coding upstream 18947 27874444 ~ 27876182 (+)
G1849658 NA non-coding upstream 122921 27771919 ~ 27772208 (+)
G1849660 NA non-coding upstream 124623 27770035 ~ 27770506 (+)
G1849652 NA non-coding upstream 270726 27624104 ~ 27624403 (+)
G1850012 NA non-coding downstream 321419 28228561 ~ 28230666 (+)
G1850667 NA non-coding downstream 554105 28461247 ~ 28461479 (+)
G1850669 NA non-coding downstream 560152 28467294 ~ 28467615 (+)
G1850688 NA non-coding downstream 587393 28494535 ~ 28494738 (+)
G1850690 NA non-coding downstream 664465 28571607 ~ 28571947 (+)
G1849208 LOC106607606 other upstream 618870 27274338 ~ 27276259 (+)
G1845108 NA other upstream 3540883 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 4548640 23345044 ~ 23346489 (+)
G1840558 fbxo28 other upstream 7109926 20781865 ~ 20785203 (+)
LOC110502429 ttc27 other upstream 7378243 20358591 ~ 20516930 (+)
G1851386 NA other downstream 1136219 29043361 ~ 29075998 (+)
G1852590 NA other downstream 2111348 30018490 ~ 30025046 (+)

Expression


Co-expression Network