XLOC_037669 (fev)


Basic Information

Item Value
gene id XLOC_037669
gene name fev
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 11548233 ~ 11551704 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073963
ATGAAAGCCTACCCTTTCACGTCCACCACCGCCACCACAATGCGACAGAACTGCGGAGGAAGCCTTATGTTTAACATGTATCTCTCAGACCCCACAGAAAATCTTCTGAAGGAAAGTAAAAGCCCCTCTTGGACCCCCATCAACACAGGCGTGCAAAAAGgaAGTGGACAAATCCAGTTATGGCAGTTTCTCCTGGAGCTGCTTTCCGACAGCGCCAATATGACCTGCATCGCCTGGGAGGGAACGAATGGAGAGTTTAAACTGATAGACCCGGACGAAGTGGCCAGACGGTGGGGGGAACGCAAGAGTAAACCGAACATGAACTACGACAAACTGAGCCGAGCTCTGCGCTATTACTACGACAAAAACATCATGACCAAGGTGCACGGAAAGCGCTACGCGTACAAATTTGACTTTAACGGTTTGGCGCAAGTGTGCCAGCCCTCCTCGACCGAACAAGCTATTTATAAGTTCCAGAGCAACTTCGCTCCCATTCAGTTTTCAGGTATTTCCAAACTCAATCTGGTTGCTCCGGGTGTTGGTCCGTCGGGCTTCTCCTACTGGCCGGGATCTCCTCCAACCCTCTACCACAGCCACAACCTGCAGCCGCCTGGACCCTTCGGTGCCGTGTCTGCGTCACATTTAAGCTGcgttaacaatataaatagtttaaataacctcaataatattaataaccacTATAACTGACTTTCCCCCATCTGCCTCAGGAGCGCGCGCTGACAGACTAGCCTACACAAGAGTAATATGTAAAAGTTCAACTAGCTGATTTCAGAACACGTAGACTAATATAGTTCAGTGACAAGTAAGAATCAAAATAAATAGGgtttaattattttatcacaTTGCCAAGAACAGTTTGGGCATAGCATTTGGTGGACTTCAGGATCAGAAAACATTTAGCGCCATCTTATGGATAAACAAACACTGTTGCGACAAATTAATCATATTCAGCTGAGGAACACAAACACGTTTTGCTTGATCTCCATACATTCATGGTAAAAAATACAGCTAGAAAATCAACGCAATGATGCAGGAACGGCTACATGGTGAGAACAAATTGTAAGCAAAAACGTGTGTTCGCTATGCTTGCAATCGAGAATATTATTCACATGTGAAGTAGACTAATTaagcgttttatttatttatttttattttgctatttatttagaCCAATATTAGTGAAATAATGGACACTGTCTGAACATCGGCAATACACTTAAAAAATTGTATATTCTGATCAATTGTAaagaataattttgtttttttcgTGATTCACGAGAATCACCAGTCGGTGTTCTCTTTTGCTTGTGATAACATATTAAAATCGTTGTTGTAATATCCctga
>TCONS_00073964
CGACAGAAACACACAAAGACATTCAAGACCCCACAGAAAATCTTCTGAAGGAAAGTAAAAGCCCCTCTTGGACCCCCATCAACACAGGCGTGCAAAAAGgaAGTGGACAAATCCAGTTATGGCAGTTTCTCCTGGAGCTGCTTTCCGACAGCGCCAATATGACCTGCATCGCCTGGGAGGGAACGAATGGAGAGTTTAAACTGATAGACCCGGACGAAGTGGCCAGACGGTGGGGGGAACGCAAGAGTAAACCGAACATGAACTACGACAAACTGAGCCGAGCTCTGCGCTATTACTACGACAAAAACATCATGACCAAGGTGCACGGAAAGCGCTACGCGTACAAATTTGACTTTAACGGTTTGGCGCAAGTGTGCCAGCCCTCCTCGACCGAACAAGCTATTTATAAGTTCCAGAGCAACTTCGCTCCCATTCAGTTTTCAGGTATTTCCAAACTCAATCTGGTTGCTCCGGGTGTTGGTCCGTCGGGCTTCTCCTACTGGCCGGGATCTCCTCCAACCCTCTACCACAGCCACAACCTGCAGCCGCCTGGACCCTTCGGTGCCGTGTCTGCGTCACATTTAAGCTGcgttaacaatataaatagtttaaataacctcaataatattaataaccacTATAACTGACTTTCCCCCATCTGCCTCAGGAGCGCGCGCTGACAGACTAGCCTACACAAGAGTAATATGTAAAAGTTCAACTAGCTGATTTCAGAACACGTAGACTAATATAGTTCAGTGACAAGTAAGAATCAAAATAAATAGGgtttaattattttatcacaTTGCCAAGAACAGTTTGGGCATAGCATTTGGTGGACTTCAGGATCAGAAAACATTTAGCGCCATCTTATGGATAAACAAACACTGTTGCGACAAATTAATCATATTCAGCTGAGGAACACAAACACGTTTTGCTTGATCTCCATACATTCATGGTAAAAAATACAGCTAGAAAATCAACGCAATGATGCAGGAACGGCTACATGGTGAGAACAAATTGTAAGCAAAAACGTGTGTTCGCTATGCTTGCAATCGAGAATATTATTCACATGTGAAGTAGACTAATTaagcgttttatttatttatttttattttgctatttatttagaCCAATATTAGTGAAATAATGGACACTGTCTGAACATCGGCAATACACTTAAAAAATTGTATATTCTGATCAATTGTAaagaataattttgtttttttcgTGATTCACGAGAATCACCAGTCGGTGTTCTCTTTTGCTTGTGATAACATATTAAAATCGTTGTTGTAATATCCctga
>TCONS_00073965
ACTCATAATATTTAACCTCTTTTACTGAGAATTGTTATTTATAAATGGgcgaaattctttttttttctcaaaaattacAGGGACAAAAACACATGTCTGACGCATATgctgcatttttattattgtcacttccatgtgtattttaaaattaccACAGAATATGGCATAATTAAATCTGAGTTATAATTGtcagatgtttttttaaaacGCTTTTTTCCAGACCCCACAGAAAATCTTCTGAAGGAAAGTAAAAGCCCCTCTTGGACCCCCATCAACACAGGCGTGCAAAAAGgaAGTGGACAAATCCAGTTATGGCAGTTTCTCCTGGAGCTGCTTTCCGACAGCGCCAATATGACCTGCATCGCCTGGGAGGGAACGAATGGAGAGTTTAAACTGATAGACCCGGACGAAGTGGCCAGACGGTGGGGGGAACGCAAGAGTAAACCGAACATGAACTACGACAAACTGAGCCGAGCTCTGCGCTATTACTACGACAAAAACATCATGACCAAGGTGCACGGAAAGCGCTACGCGTACAAATTTGACTTTAACGGTTTGGCGCAAGTGTGCCAGCCCTCCTCGACCGAACAAGCTATTTATAAGTTCCAGAGCAACTTCGCTCCCATTCAGTTTTCAGGTATTTCCAAACTCAATCTGGTTGCTCCGGGTGTTGGTCCGTCGGGCTTCTCCTACTGGCCGGGATCTCCTCCAACCCTCTACCACAGCCACAACCTGCAGCCGCCTGGACCCTTCGGTGCCGTGTCTGCGTCACATTTAAGCTGcgttaacaatataaatagtttaaataacctcaataatattaataaccacTATAACTGACTTTCCCCCATCTGCCTCAGGAGCGCGCGCTGACAGACTAGCCTACACAAGAGTAATATGTAAAAGTTCAACTAGCTGATTTCAGAACACGTAGACTAATATAGTTCAGTGACAAGTAA
>TCONS_00073966
ATGACCTGCATCGCCTGGGAGGGAACGAATGGAGAGTTTAAACTGATAGACCCGGACGAAGTGGCCAGACGGTGGGGGGAACGCAAGAGTAAACCGAACATGAACTACGACAAACTGAGCCGAGCTCTGCGCTATTACTACGACAAAAACATCATGACCAAGGTGCACGGAAAGCGCTACGCGTACAAATTTGACTTTAACGGTTTGGCGCAAGTGTGCCAGCCCTCCTCGACCGAACAAGCTATTTATAAGTTCCAGAGCAACTTCGCTCCCATTCAGTTTTCAGGTATTTCCAAACTCAATCTGGTTGCTCCGGGTGTTGGTCCGTCGGGCTTCTCCTACTGGCCGGGATCTCCTCCAACCCTCTACCACAGCCACAACCTGCAGCCGCCTGGACCCTTCGGTGCCGTGTCTGCGTCACATTTAAGCTGcgttaacaatataaatagtttaaataacctcaataatattaataaccacTATAACTGACT
>TCONS_00073967
TCAACCACTGTCTTGTATCCGAGGCTTGTTTTAAGTTGCCTGCGATCTCTTAATGACTCAGGCAGCTAAAGCAAGTCTGGGAGGCCAGAGACAACACGACA

Function

symbol description
fev Enables transcription cis-regulatory region binding activity. Acts upstream of or within hematopoietic stem cell differentiation and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in several structures, including brain; endothelial cell; pancreatic bud; presumptive blood; and serotonergic neurons. Orthologous to human FEV (FEV transcription factor, ETS family member).

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0030154 cell differentiation biological_process
GO:0007275 multicellular organism development biological_process
GO:0060218 hematopoietic stem cell differentiation biological_process
GO:0007399 nervous system development biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function

KEGG:

id description
ko05202 Transcriptional misregulation in cancer
ko03000 Transcription factors

ZFIN:

id description
ZDB-GENE-070112-1852 Enables transcription cis-regulatory region binding activity. Acts upstream of or within hematopoietic stem cell differentiation and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in several structures, including brain; endothelial cell; pancreatic bud; presumptive blood; and serotonergic neurons. Orthologous to human FEV (FEV transcription factor, ETS family member).

Ensembl:

ensembl_id ENSDARG00000009242 ENSDARG00000080888

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073963 False 1366 mRNA 0.42 3 11548233 11550711
TCONS_00073964 False 1305 mRNA 0.42 3 11548233 11551608
TCONS_00073965 False 959 processed_transcript 0.44 2 11548772 11550397
TCONS_00073966 False 491 mRNA 0.49 1 11548889 11549379
TCONS_00073967 True 101 miRNA 0.49 1 11551604 11551704

Neighbor

gene id symbol gene type direction distance location
XLOC_037668 chpfa coding downstream 285005 11245962 ~ 11263228 (-)
XLOC_037667 BX000444.1 coding downstream 701684 10845918 ~ 10846549 (-)
XLOC_037666 si:ch1073-416j23.1 coding downstream 743002 10781687 ~ 10805231 (-)
XLOC_037665 CABZ01053619.1 coding downstream 769618 10778227 ~ 10778615 (-)
XLOC_037664 tmbim1b coding downstream 779136 10758339 ~ 10769097 (-)
XLOC_037670 cryba2b coding upstream 2385 11554089 ~ 11560432 (-)
XLOC_037671 NA coding upstream 19608 11571312 ~ 11572354 (-)
XLOC_037672 umps coding upstream 24798 11576502 ~ 11587070 (-)
XLOC_037673 NA coding upstream 44283 11595987 ~ 11655031 (-)
XLOC_037674 zc3h15 coding upstream 113093 11664797 ~ 11676491 (-)
XLOC_037663 NA non-coding downstream 1177608 10368380 ~ 10370625 (-)
XLOC_037651 AL954142.4 non-coding downstream 2177367 9355372 ~ 9370866 (-)
XLOC_037649 NA non-coding downstream 2259163 9286419 ~ 9289070 (-)
XLOC_037645 NA non-coding downstream 2497718 9026383 ~ 9050515 (-)
XLOC_037675 NA non-coding upstream 270675 11822379 ~ 11855305 (-)
XLOC_037677 NA non-coding upstream 525139 12076843 ~ 12171785 (-)
XLOC_037688 NA non-coding upstream 1338194 12889898 ~ 12903013 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G81582 NA non-coding CM030129.1 CM030129.1 35039257 ~ 35039467 (+)