G1850688


Basic Information

Item Value
gene id G1850688
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28494535 ~ 28494738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2118346
ATACAGGTTAAGCCTCTCTCACAACAACGGTTGTCACATAGGACTGTAGACACTATCCTGCAAGCATATAGCCTAGCTGGCCGGCCCAGTGCCATCCTCTGTGGTAGCACACTCCACCAGGGGAGTTTCCACCTCTTGGGCACTGCTTAAGGGAGTCCCCCTCTCTGGCATATGTGTGGCTGGCAGCTGGGCATCCCCCAGTAC

Function

NR:

description
LOW QUALITY PROTEIN: ryanodine receptor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2118346 True 204 lncRNA 0.56 1 28494535 28494738

Neighbor

gene id symbol gene type direction distance location
LOC110502539 LOC106607826 coding upstream 28245 28462455 ~ 28466290 (+)
LOC110502531 LOC106607719 coding upstream 353862 28098447 ~ 28140673 (+)
LOC110502528 bic1a coding upstream 416281 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 coding upstream 501346 27990245 ~ 27993189 (+)
LOC110503097 LOC106577081 coding upstream 654196 27790759 ~ 27848517 (+)
LOC110502541 LOC106607837 coding downstream 2838 28497576 ~ 28571528 (+)
LOC110502542 LOC106607841 coding downstream 103175 28597913 ~ 28603119 (+)
LOC110502543 LOC106607859 coding downstream 123769 28618507 ~ 28621114 (+)
LOC110502544 LOC106607864 coding downstream 139308 28634046 ~ 28652668 (+)
slc22a15 slc22a15 coding downstream 167936 28662674 ~ 28671512 (+)
G1850669 NA non-coding upstream 26920 28467294 ~ 28467615 (+)
G1850667 NA non-coding upstream 33056 28461247 ~ 28461479 (+)
G1850012 NA non-coding upstream 263869 28228561 ~ 28230666 (+)
G1849835 NA non-coding upstream 587393 27895129 ~ 27907142 (+)
G1849821 NA non-coding upstream 618353 27874444 ~ 27876182 (+)
G1850690 NA non-coding downstream 76869 28571607 ~ 28571947 (+)
G1850763 NA non-coding downstream 92989 28587727 ~ 28587965 (+)
G1850772 NA non-coding downstream 96741 28591479 ~ 28592148 (+)
G1850773 NA non-coding downstream 97456 28592194 ~ 28592431 (+)
G1850777 NA non-coding downstream 98651 28593389 ~ 28593663 (+)
G1849208 LOC106607606 other upstream 1218276 27274338 ~ 27276259 (+)
G1845108 NA other upstream 4140289 24326264 ~ 24354246 (+)
G1844044 LOC106607169 other upstream 5148046 23345044 ~ 23346489 (+)
G1851386 NA other downstream 548623 29043361 ~ 29075998 (+)
G1852590 NA other downstream 1523752 30018490 ~ 30025046 (+)
LOC110502560 LOC106607954 other downstream 2052386 30547124 ~ 30659333 (+)
G1853092 NA other downstream 2310812 30805550 ~ 30806454 (+)

Expression


Co-expression Network