G1850690


Basic Information

Item Value
gene id G1850690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28571607 ~ 28571947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2118348
ccctttgccttgatgacagctttgcacactcttggcattctctcaaccagcttcaagaggtagtcacatggaatgcatttcaaataacaggtgtgccttgttaaaagttaaatagtggagtttgagccaatcagttgtgttgtgaaagtccatattatggcaggaacagcttaaataagcaaagagaaatgacagtccatcattactaagTAGTctatctggaaaatgtcaagaactttcttTAAATTtcaagaaagtttcttcaagtgcagtcgcaaaaaccatcaagcactatgatgaaactggctctcatgagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2118348 True 318 lncRNA 0.39 2 28571607 28571947

Neighbor

gene id symbol gene type direction distance location
LOC110502541 LOC106607837 coding upstream 79 28497576 ~ 28571528 (+)
LOC110502539 LOC106607826 coding upstream 105317 28462455 ~ 28466290 (+)
LOC110502531 LOC106607719 coding upstream 430934 28098447 ~ 28140673 (+)
LOC110502528 bic1a coding upstream 493353 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 coding upstream 578418 27990245 ~ 27993189 (+)
LOC110502542 LOC106607841 coding downstream 25966 28597913 ~ 28603119 (+)
LOC110502543 LOC106607859 coding downstream 46560 28618507 ~ 28621114 (+)
LOC110502544 LOC106607864 coding downstream 62099 28634046 ~ 28652668 (+)
slc22a15 slc22a15 coding downstream 90727 28662674 ~ 28671512 (+)
LOC110502549 LOC106608800 coding downstream 205186 28777133 ~ 28780702 (+)
G1850688 NA non-coding upstream 76869 28494535 ~ 28494738 (+)
G1850669 NA non-coding upstream 103992 28467294 ~ 28467615 (+)
G1850667 NA non-coding upstream 110128 28461247 ~ 28461479 (+)
G1850012 NA non-coding upstream 340941 28228561 ~ 28230666 (+)
G1849835 NA non-coding upstream 664465 27895129 ~ 27907142 (+)
G1850763 NA non-coding downstream 15780 28587727 ~ 28587965 (+)
G1850772 NA non-coding downstream 19532 28591479 ~ 28592148 (+)
G1850773 NA non-coding downstream 20247 28592194 ~ 28592431 (+)
G1850777 NA non-coding downstream 21442 28593389 ~ 28593663 (+)
G1850779 NA non-coding downstream 22164 28594111 ~ 28594354 (+)
G1849208 LOC106607606 other upstream 1295348 27274338 ~ 27276259 (+)
G1845108 NA other upstream 4217361 24326264 ~ 24354246 (+)
G1851386 NA other downstream 471414 29043361 ~ 29075998 (+)
G1852590 NA other downstream 1446543 30018490 ~ 30025046 (+)
LOC110502560 LOC106607954 other downstream 1975177 30547124 ~ 30659333 (+)
G1853092 NA other downstream 2233603 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 2254638 30826585 ~ 30834692 (+)

Expression


Co-expression Network