G1851171


Basic Information

Item Value
gene id G1851171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28933529 ~ 28933823 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2118876
cctttgaagaatgtctctggtggtcaattggatacgttgtagtaacgtcgttgtgtgatagacgggatactctctctgttccttcctaactctcgtttgcatctgctgttgctaactcaacggctaggaggtatcacttctgtagtgaatacgagttcaaagttcataccattcggaaccaaagctcacgctgatgttggcttcattctgtagttattatctgaacattctgacatcggaccgtcgtcctcacatcctcggaacaggaggttatattgtcgtcaaggctttatat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2118876 True 295 lncRNA 0.44 1 28933529 28933823

Neighbor

gene id symbol gene type direction distance location
LOC110502552 tsn14 coding upstream 16123 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 109735 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 136667 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 152827 28777133 ~ 28780702 (+)
slc22a15 slc22a15 coding upstream 262017 28662674 ~ 28671512 (+)
LOC110502556 NA coding downstream 197820 29131643 ~ 29134853 (+)
LOC118943859 NA coding downstream 679429 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 1059774 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 1109704 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1651073 30547124 ~ 30659333 (+)
G1851127 NA non-coding upstream 75998 28857275 ~ 28857531 (+)
G1851098 NA non-coding upstream 98701 28834622 ~ 28834828 (+)
G1851027 NA non-coding upstream 147788 28785521 ~ 28785741 (+)
G1851026 NA non-coding upstream 148220 28785105 ~ 28785309 (+)
G1851177 NA non-coding downstream 7405 28941228 ~ 28941508 (+)
G1851179 NA non-coding downstream 12367 28946190 ~ 28946391 (+)
G1851181 NA non-coding downstream 13111 28946934 ~ 28947138 (+)
G1851194 NA non-coding downstream 27885 28961708 ~ 28961957 (+)
G1851202 NA non-coding downstream 35048 28968871 ~ 28969131 (+)
LOC110502541 LOC106607837 other upstream 408292 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 927315 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 940566 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 1657270 27274338 ~ 27276259 (+)
G1845108 NA other upstream 4579283 24326264 ~ 24354246 (+)
G1851386 NA other downstream 109538 29043361 ~ 29075998 (+)
G1852590 NA other downstream 1084667 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1871727 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1892762 30826585 ~ 30834692 (+)

Expression


Co-expression Network