G1851202


Basic Information

Item Value
gene id G1851202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 28968871 ~ 28969131 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2118907
TATTGCAATAATGGAGCATTAACGGTCACGCAATGGAGATTGTTAAAAGCCCTACGTTCTCCTGAGTCTTcgtgacaaacaacagatgtgtgTAATGGGTCTAAAGGTGAAATGTTGTATGTAAAGGAGTAACCCCCCAGTCATATAGCATTTGCTGTGAAGACTGTTCTTATTGTATAGAAACCAGGGGTTGGCCCCAAAGACAAGGTTTTTCTTATCAGCTGTCCATACCAGAGACATCTCCTCATAGTACACAAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2118907 True 261 lncRNA 0.42 1 28968871 28969131

Neighbor

gene id symbol gene type direction distance location
LOC110502552 tsn14 coding upstream 51465 28901697 ~ 28917406 (+)
LOC110502551 LOC106607927 coding upstream 145077 28818971 ~ 28823794 (+)
LOC110502550 LOC106607923 coding upstream 172009 28793894 ~ 28796862 (+)
LOC110502549 LOC106608800 coding upstream 188169 28777133 ~ 28780702 (+)
slc22a15 slc22a15 coding upstream 297359 28662674 ~ 28671512 (+)
LOC110502556 NA coding downstream 162512 29131643 ~ 29134853 (+)
LOC118943859 NA coding downstream 644121 29613252 ~ 29616570 (+)
si:ch1073-126c3.2 NA coding downstream 1024466 29993597 ~ 29995811 (+)
gfra1a rtgfra1 coding downstream 1074396 30043527 ~ 30144813 (+)
LOC110502560 LOC106607954 coding downstream 1615765 30547124 ~ 30659333 (+)
G1851194 NA non-coding upstream 6914 28961708 ~ 28961957 (+)
G1851181 NA non-coding upstream 21733 28946934 ~ 28947138 (+)
G1851179 NA non-coding upstream 22480 28946190 ~ 28946391 (+)
G1851177 NA non-coding upstream 27363 28941228 ~ 28941508 (+)
G1851171 NA non-coding upstream 35048 28933529 ~ 28933823 (+)
G1851204 NA non-coding downstream 2062 28971193 ~ 28971604 (+)
G1851208 NA non-coding downstream 9296 28978427 ~ 28978702 (+)
G1851313 NA non-coding downstream 20160 28989291 ~ 28989518 (+)
G1851319 NA non-coding downstream 23835 28992966 ~ 28993191 (+)
G1851490 NA non-coding downstream 198443 29167574 ~ 29175373 (+)
LOC110502541 LOC106607837 other upstream 443634 28497576 ~ 28571528 (+)
LOC110502528 bic1a other upstream 962657 28001291 ~ 28078254 (+)
LOC110502527 LOC106607701 other upstream 975908 27990245 ~ 27993189 (+)
G1849208 LOC106607606 other upstream 1692612 27274338 ~ 27276259 (+)
G1845108 NA other upstream 4614625 24326264 ~ 24354246 (+)
G1851386 NA other downstream 74230 29043361 ~ 29075998 (+)
G1852590 NA other downstream 1049359 30018490 ~ 30025046 (+)
G1853092 NA other downstream 1836419 30805550 ~ 30806454 (+)
G1853162 rps27a other downstream 1857454 30826585 ~ 30834692 (+)

Expression


Co-expression Network